Skip to content

Commit

Permalink
Fix some bugs
Browse files Browse the repository at this point in the history
  • Loading branch information
zhanghao-njmu committed Nov 14, 2023
1 parent ea08bbb commit 36969ca
Show file tree
Hide file tree
Showing 22 changed files with 647 additions and 258 deletions.
4 changes: 3 additions & 1 deletion DESCRIPTION
Original file line number Diff line number Diff line change
Expand Up @@ -21,6 +21,8 @@ Imports:
ComplexHeatmap (>= 2.13.0),
data.table,
dplyr (>= 1.1.0),
future,
future.apply,
ggnewscale,
ggplot2 (>= 3.4.0),
ggrepel,
Expand All @@ -37,6 +39,7 @@ Imports:
mgcv,
Matrix,
patchwork,
pbapply,
png,
plotly,
proxyC,
Expand Down Expand Up @@ -68,7 +71,6 @@ Suggests:
devtools,
DDRTree,
e1071,
future,
ggpubr,
ggridges,
ggsignif,
Expand Down
6 changes: 6 additions & 0 deletions NAMESPACE
Original file line number Diff line number Diff line change
Expand Up @@ -57,6 +57,7 @@ export(FeatureDimPlot3D)
export(FeatureHeatmap)
export(FeatureStatPlot)
export(FetchH5)
export(FindExpressedMarkers)
export(GSEAPlot)
export(GeneConvert)
export(GraphPlot)
Expand Down Expand Up @@ -206,6 +207,7 @@ importFrom(ComplexHeatmap,width.Legends)
importFrom(HDF5Array,TENxMatrix)
importFrom(HDF5Array,writeTENxMatrix)
importFrom(Matrix,Matrix)
importFrom(Matrix,as.matrix)
importFrom(Matrix,colMeans)
importFrom(Matrix,colSums)
importFrom(Matrix,rowMeans)
Expand All @@ -228,6 +230,7 @@ importFrom(Seurat,Assays)
importFrom(Seurat,AverageExpression)
importFrom(Seurat,CaseMatch)
importFrom(Seurat,Cells)
importFrom(Seurat,Command)
importFrom(Seurat,CreateAssayObject)
importFrom(Seurat,CreateDimReducObject)
importFrom(Seurat,CreateSeuratObject)
Expand Down Expand Up @@ -327,6 +330,8 @@ importFrom(dplyr,reframe)
importFrom(dplyr,slice_head)
importFrom(dplyr,summarise)
importFrom(dplyr,summarise_at)
importFrom(future,nbrOfWorkers)
importFrom(future.apply,future_sapply)
importFrom(ggforce,geom_mark_ellipse)
importFrom(ggforce,geom_mark_hull)
importFrom(ggnewscale,new_scale)
Expand Down Expand Up @@ -511,6 +516,7 @@ importFrom(methods,new)
importFrom(methods,slot)
importFrom(methods,slotNames)
importFrom(patchwork,wrap_plots)
importFrom(pbapply,pbsapply)
importFrom(plotly,add_trace)
importFrom(plotly,as_widget)
importFrom(plotly,layout)
Expand Down
Loading

0 comments on commit 36969ca

Please sign in to comment.