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barrier to avoid race condn #207

barrier to avoid race condn

barrier to avoid race condn #207

Workflow file for this run

name: CI_MPI
on: [push, pull_request]
jobs:
test:
name: Julia ${{ matrix.version }} - ${{ matrix.os }} - ${{ matrix.arch }} - ${{ github.event_name }}
runs-on: ${{ matrix.os }}
env:
# P4EST_ROOT_DIR: "/opt/p4est/2.2/"
JULIA_PETSC_LIBRARY: "/opt/petsc/3.18/lib/libpetsc"
strategy:
fail-fast: false
matrix:
version:
- '1.9'
os:
- ubuntu-latest
arch:
- x64
steps:
- uses: actions/checkout@v2
# - name: Cache p4est
# id: cache-p4est
# uses: actions/cache@v2
# with:
# path: ${{env.P4EST_ROOT_DIR}}
# key: ${{ runner.os }}-build-${{ env.P4EST_ROOT_DIR }}-
# restore-keys: |
# ${{ runner.os }}-build-${{ env.P4EST_ROOT_DIR }}-
# ${{ runner.os }}-build-
# ${{ runner.os }}-
- uses: julia-actions/setup-julia@v1
with:
version: ${{ matrix.version }}
arch: ${{ matrix.arch }}
- name: Install p4est/petsc dependencies
run: |
sudo apt-get update
sudo apt-get install -y wget gfortran g++ openmpi-bin libopenmpi-dev
- name: Install petsc
run: |
CURR_DIR=$(pwd)
PACKAGE=petsc
VERSION=3.18
INSTALL_ROOT=/opt
PETSC_INSTALL=$INSTALL_ROOT/$PACKAGE/$VERSION
TAR_FILE=$PACKAGE-$VERSION.tar.gz
URL="https://ftp.mcs.anl.gov/pub/petsc/release-snapshots/"
ROOT_DIR=/tmp
SOURCES_DIR=$ROOT_DIR/$PACKAGE-$VERSION
BUILD_DIR=$SOURCES_DIR/build
wget -q $URL/$TAR_FILE -O $ROOT_DIR/$TAR_FILE
mkdir -p $SOURCES_DIR
tar xzf $ROOT_DIR/$TAR_FILE -C $SOURCES_DIR --strip-components=1
cd $SOURCES_DIR
./configure --prefix=$PETSC_INSTALL --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 \
--download-mumps --download-scalapack --download-parmetis --download-metis \
--download-ptscotch --with-debugging --with-x=0 --with-shared=1 \
--with-mpi=1 --with-64-bit-indices
make
make install
- uses: julia-actions/julia-buildpkg@latest
- run: echo $PWD
- run: julia --project=. -e 'using Pkg; Pkg.instantiate();'
- run: julia --project=. -e 'using Pkg; Pkg.add("MPIPreferences")'
- run: julia --project=. -e 'using MPIPreferences; MPIPreferences.use_system_binary()'
- run: julia --project=. -e 'using Pkg; Pkg.build(); Pkg.precompile()'
- run: julia --project=. --color=yes --check-bounds=yes test/mpi/runtests.jl
- uses: codecov/codecov-action@v4
with:
file: lcov.info
token: ${{ secrets.CODECOV_TOKEN }}