feat: feature/byer3/thermal well #3156

tjb-ltk · 2024-06-03T14:36:16Z

Add thermal well formulation for modeling convection in compositional flow models

…fix error message for negative mass rate

…or thermal. Enabled kernels/ computes to be thermal aware via specialization or constexpr on template parameter. Most well terms have dt ders. Code tested on 3 standard isothermal models to smoke out offset errors. Lots of asserts left in code to ensure general storage arrays are correct eg.. (dProp[PresIndex]==dprop_dp).. these along with dprop_dp, dprop_dcomp etc arrays will be removed after most testing. Next step to add energy balance to well element flows and perf inflows

…coupling 3) residualnomr calcs, 4) some isothermal , 5) refactoring 6) next focus solution updating/scaling

…al flux index bug 3) 2 isothermal models tested with refactored code 4) thermal case crashes at 2nd linear solve well internal energy derivative = 0

…inear solve well methods 3) next step verify simple test case results

…ng 3) removed debug std::couts 4) next steps a) address constant temp BC b) singlephase thermo dev c) deriv checker

…l derivative checker and treating warnings as errors

…s for shutin well 3) call well initialization code for wells that come online at t> 0

codecov · 2024-06-03T16:06:09Z

Codecov Report

Attention: Patch coverage is 73.99166% with 561 lines in your changes missing coverage. Please review.

Project coverage is 57.66%. Comparing base (cd8175d) to head (f5ef324).
Report is 1 commits behind head on develop.

Files with missing lines	Patch %	Lines
...ells/ThermalCompositionalMultiphaseWellKernels.hpp	49.51%	157 Missing ⚠️
...rs/multiphysics/CoupledReservoirAndWellKernels.hpp	0.00%	131 Missing ⚠️
...Solvers/fluidFlow/wells/PerforationFluxKernels.hpp	70.54%	76 Missing ⚠️
...dFlow/wells/CompositionalMultiphaseWellKernels.hpp	86.11%	44 Missing ⚠️
...ies/ThermalCompositionalMultiphaseReservoirFVM.hpp	0.00%	36 Missing ⚠️
...omponents/physicsSolvers/KernelLaunchSelectors.hpp	45.45%	36 Missing ⚠️
.../physicsSolvers/fluidFlow/wells/WellSolverBase.cpp	56.14%	25 Missing ⚠️
...dFlow/wells/CompositionalMultiphaseWellKernels.cpp	76.11%	16 Missing ⚠️
...ysics/CompositionalMultiphaseReservoirAndWells.cpp	17.64%	14 Missing ⚠️
...ers/fluidFlow/CompositionalMultiphaseHybridFVM.cpp	0.00%	9 Missing ⚠️
... and 6 more

Additional details and impacted files

@@             Coverage Diff             @@
##           develop    #3156      +/-   ##
===========================================
+ Coverage    56.79%   57.66%   +0.87%     
===========================================
  Files         1076     1086      +10     
  Lines        95739    97377    +1638     
===========================================
+ Hits         54373    56156    +1783     
+ Misses       41366    41221     -145

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paveltomin · 2024-09-18T18:16:55Z

src/coreComponents/physicsSolvers/fluidFlow/wells/CompositionalMultiphaseWell.cpp

-    currentBHP = pres[iwelemRef] + totalMassDens[iwelemRef] * diffGravCoef;
-    dCurrentBHP_dPres = 1 + dTotalMassDens_dPres[iwelemRef] * diffGravCoef;
-    for( integer ic = 0; ic < numComp; ++ic )
+    //integer constexpr NUM_COMP = NC();


remove commented

paveltomin · 2024-09-18T18:19:58Z

src/coreComponents/physicsSolvers/fluidFlow/wells/CompositionalMultiphaseWell.cpp

+        isothermalCompositionalMultiphaseBaseKernels::
+          KernelLaunchSelectorCompTherm< PressureRelationKernel >( numFluidComponents(), isThermal,
+                                                                   //isothermalCompositionalMultiphaseBaseKernels::KernelLaunchSelector1<
+                                                                   // PressureRelationKernel >( numFluidComponents(),


remove commented

src/coreComponents/physicsSolvers/fluidFlow/wells/CompositionalMultiphaseWellFields.hpp

src/coreComponents/common/KernelLaunchSelectors.hpp

src/coreComponents/dataRepository/Group.hpp

CusiniM

Let's start with this.

src/coreComponents/unitTests/fluidFlowTests/testCompFlowUtils.hpp

src/coreComponents/unitTests/wellsTests/testThermalReservoirCompositionalMultiphaseSSWells.cpp

src/coreComponents/physicsSolvers/fluidFlow/wells/PerforationFluxKernels.hpp

src/coreComponents/physicsSolvers/fluidFlow/wells/CompositionalMultiphaseWellFields.hpp

CusiniM · 2024-09-18T19:02:47Z

src/coreComponents/physicsSolvers/fluidFlow/IsothermalCompositionalMultiphaseBaseKernels.hpp

@@ -2445,6 +2454,54 @@ void KernelLaunchSelector2( integer const numComp, integer const numPhase, ARGS
  }
 }

+template< typename KERNELWRAPPER, typename ... ARGS >
+void KernelLaunchSelector_NC_NP_THERM( integer const numComp, integer const numPhase, integer const isThermal, ARGS && ... args )


why did you have to add this? didn't we already have multiphase compostional thermal kernels?

is this ever used? I can't find it...

It seems that we have too many of these dispatches. We should only have 1 dispatch for compNumber, phaseNumber and thermal and use it everywhere.

will delete... yes we have several dispatches..In the spirit of " too many" 1) derivative offset structs... since prop derivatives have thermal slot at index 1. traits classes templated on thermal are needed in isothermal runs... where should we put these structs... . I think these and dispatches should all be in some common location so the developer knows what is available... 2) further single/multiphase should be combined, and 3) specializations should only be for different variable sets or implicitness and phase comp partitioning arrays introduced ....

why not using the ones you created?

In. KernelLaunchSelector2 there is a comment // Ideally this would be inside the dispatch, but it breaks on Summit with GCC 9.1.0 and CUDA 11.0.3. I thought it would be better to make that change in different PR.

CusiniM · 2024-09-18T19:10:35Z

src/coreComponents/common/KernelLaunchSelectors.hpp

if this file sits in common it should be a lot more generic IMO.

I could move to fluidflow...

moved to physicsSolvers

src/coreComponents/dataRepository/Group.hpp

src/coreComponents/physicsSolvers/fluidFlow/IsothermalCompositionalMultiphaseBaseKernels.hpp

src/coreComponents/physicsSolvers/fluidFlow/wells/SinglePhaseWell.cpp

src/coreComponents/physicsSolvers/fluidFlow/IsothermalCompositionalMultiphaseBaseKernels.hpp

paveltomin · 2024-10-07T17:06:50Z

@CusiniM @rrsettgast can we please merge it? bunch of useful changes for wells here

CusiniM · 2024-10-09T00:09:38Z

@CusiniM @rrsettgast can we please merge it? bunch of useful changes for wells here

I had left some comments and if they were addressed then I am fine with merging it. However, some things in this PR are done in a way that it's quite different from the rest of the code so I wanted someone else to have a close look at it too.

CusiniM

I am not sure I would have put those dispatch functionalities in common/internal. Otherwise this PR looks good to me now

rrsettgast · 2024-10-23T22:46:39Z

src/coreComponents/constitutive/fluid/singlefluid/SingleFluidBase.hpp

+ * @detail if isThermal is true, the constitutive model compute the enthalpy and internal energy of the phase.
+ *         This can be used to check the compatibility of the constitutive model with the solver
+ */
+  virtual bool isThermal() const { return false; }


@tjb-ltk Is this resolved?

src/coreComponents/mesh/WellElementSubRegion.cpp

rrsettgast · 2024-10-23T22:51:26Z

src/coreComponents/physicsSolvers/fluidFlow/ThermalCompositionalMultiphaseBaseKernels.hpp

@@ -599,7 +601,7 @@ class ScalingForSystemSolutionKernel : public isothermalCompositionalMultiphaseB
    {
      // compute the change in temperature
      real64 const temp = m_temperature[ei];
-      real64 const absTempChange = LvArray::math::abs( m_localSolution[stack.localRow + m_numComp + 1] );
+      real64 const absTempChange = LvArray::math::abs( m_localSolution[stack.localRow + m_temperatureOffset] );


this change looks strange to me...is this OK?

Agree. the change was needed so that wells could use the scaling kernel implemented for the reservoir. The location of the temperature variable is different for well and reservoir, hence the offset variable. It's ok but fragile. Another PR could see this being replaced with a traits class, but defining/changing lineups with traits classes would probably need more vetting beyond this kernel.

rrsettgast · 2024-10-23T22:54:39Z

src/coreComponents/physicsSolvers/multiphysics/CoupledReservoirAndWellKernels.hpp

@@ -0,0 +1,592 @@
+/*


The changes here don't seem well related...or thermal related. I missed it? Can you explain?

Originally the well-res coupling derivatives were not in kernel classes but assembled in CompositionalMultiphaseReservoirAndWells.cpp. With the addition of thermal ,kernels were added for iso + thermal and are in CoupledReservoirAndWellKernels.hpp

src/coreComponents/unitTests/fluidFlowTests/testCompFlowUtils.hpp

… into feature/byer3/thermal_well

…ll values), quantites only used for reporting

.integrated_tests.yaml

tjb-ltk and others added 24 commits December 20, 2023 14:48

Add support for mass constraits (inj wells only)

3c5801c

Mass constraint test cases - fixed value & table input

de5b3da

add proper isZero check

993296d

Merge branch 'develop' into feature/byer3/mass_inj_const

7bd1201

Throw error if massinj constraint and useSurfaceConditions set to 0, …

825d27d

…fix error message for negative mass rate

run make uncrustify_style

c94eed6

fix for UseSurfaceConditions set to 1

701bce6

Thermal well devs

6858b81

Fix rel mode compiler errors ++

8fd8f40

Load well prop ders in containers similar to reservoir

384e29e

thermal devs- 1) energy eqn for perf in/out flows, 2) reservoir well …

aee32bc

…coupling 3) residualnomr calcs, 4) some isothermal , 5) refactoring 6) next focus solution updating/scaling

1) fix isthermal well field runtime error 2) fix refactored isotherm…

6323c13

…al flux index bug 3) 2 isothermal models tested with refactored code 4) thermal case crashes at 2nd linear solve well internal energy derivative = 0

thermal well devs - 1) derivative bugfixes 2) added thermal to post l…

34a2a01

…inear solve well methods 3) next step verify simple test case results

thermal devs - 1) fixes for > 1 well seg 2) added soln updating/scali…

828b009

…ng 3) removed debug std::couts 4) next steps a) address constant temp BC b) singlephase thermo dev c) deriv checker

1) Added simple temperature constraint 2) Fixes from running numerica…

8b10201

…l derivative checker and treating warnings as errors

missing merge in previous commit

25e3503

more merge fixes

aa800e3

1) add iterative solver config for thermal res+well 2) skip well calc…

c9138c5

…s for shutin well 3) call well initialization code for wells that come online at t> 0

merge dev 20240526

5d95d0f

merge with dev

b4983b0

code cleanup

d297111

Use phase fraction not phase vol fraction ..and ders

0ec258e

fix for spe11b

a489169

tjb-ltk requested review from paveltomin and CusiniM June 3, 2024 14:36

fix pedantry

420855d

tjb-ltk added 2 commits June 5, 2024 08:48

1) add Aww numerical derivative unit tests, 2) thermal index fix

32ae6b9

more pedantics

bea94d5

paveltomin reviewed Sep 18, 2024

View reviewed changes

src/coreComponents/physicsSolvers/fluidFlow/wells/CompositionalMultiphaseWellFields.hpp Outdated Show resolved Hide resolved

paveltomin approved these changes Sep 18, 2024

View reviewed changes

CusiniM reviewed Sep 18, 2024

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src/coreComponents/common/KernelLaunchSelectors.hpp Outdated Show resolved Hide resolved

CusiniM reviewed Sep 18, 2024

View reviewed changes

src/coreComponents/dataRepository/Group.hpp Outdated Show resolved Hide resolved

CusiniM reviewed Sep 18, 2024

View reviewed changes

src/coreComponents/physicsSolvers/fluidFlow/wells/SinglePhaseWell.cpp Show resolved Hide resolved

src/coreComponents/physicsSolvers/fluidFlow/IsothermalCompositionalMultiphaseBaseKernels.hpp Show resolved Hide resolved

Code cleanup

f1f633b

CusiniM approved these changes Oct 9, 2024

View reviewed changes

move KernalLaunchSelectors from common to physicsSolvers

e659c7c

tjb-ltk added flag: requires rebaseline Requires rebaseline branch in integratedTests and removed flag: ready for review labels Oct 10, 2024

rrsettgast approved these changes Oct 23, 2024

View reviewed changes

tjb-ltk and others added 6 commits October 24, 2024 09:11

PR requested changes

3162266

dev merge

988ae2b

fix pedantry

dcb533b

Merge branch 'develop' into feature/byer3/thermal_well

7e3619c

fix compilation errors.

72f8895

Merge branch 'feature/byer3/thermal_well' of github.com:GEOS-DEV/GEOS…

32d1d28

… into feature/byer3/thermal_well

tjb-ltk added the ci: run code coverage enables running of the code coverage CI jobs label Oct 28, 2024

tjb-ltk added 2 commits October 29, 2024 07:04

update baselines

12e9314

perfs global res cell index set with wrong array (node instead of ce…

aa71f2a

…ll values), quantites only used for reporting

CusiniM reviewed Oct 31, 2024

View reviewed changes

.integrated_tests.yaml Outdated Show resolved Hide resolved

Update .integrated_tests.yaml

f5ef324

CusiniM merged commit 890c5e7 into develop Oct 31, 2024
25 checks passed

CusiniM deleted the feature/byer3/thermal_well branch October 31, 2024 18:27

victorapm mentioned this pull request Dec 17, 2024

MGR recipe for thermal multiphase coupled flow-wellbore #2689

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feat: feature/byer3/thermal well #3156

feat: feature/byer3/thermal well #3156

tjb-ltk commented Jun 3, 2024 •

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feat: feature/byer3/thermal well #3156

feat: feature/byer3/thermal well #3156

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tjb-ltk commented Jun 3, 2024 •

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