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Modify build documents for problems from JOSS reviewers #3258

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merged 7 commits into from
Aug 21, 2024
Merged

Modify build documents for problems from JOSS reviewers #3258

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fbf114d
add Apple MacOS build doc
rrsettgast Jul 31, 2024
6b55535
format rst
rrsettgast Jul 31, 2024
6044f37
fix rst formatting
rrsettgast Jul 31, 2024
5d6ea67
fix rst formatting
rrsettgast Aug 1, 2024
edf7a2a
Merge branch 'docs/cusini/joss-review-docs-suggetions' into documenta…
rrsettgast Aug 21, 2024
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Apply suggestions from code review
rrsettgast Aug 21, 2024
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Merge branch 'docs/cusini/joss-review-docs-suggetions' into documenta…
rrsettgast Aug 21, 2024
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91 changes: 91 additions & 0 deletions src/docs/sphinx/buildGuide/AppleMacOS.rst
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.. _AppleMacOS:

Building Apple MacOS
==============

Install homebrew
----------------

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.. code-block::

/bin/bash -c "$(curl -fsSL https://raw.githubusercontent.com/Homebrew/install/HEAD/install.sh)"
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maybe replace by link to homebrew in case this changes as some point, and then there is also other information on how to setup homebrew.

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yes...good idea

(echo; echo 'eval "$(/opt/homebrew/bin/brew shellenv)"') >> /Users/settgast1/.zprofile
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Is this necessary? Don't really like my PATH being modified when I'm installing some package. Also it assumes you are using zsh which should be mentioned (for example I don't).

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I mean I have this line in my shell environment too but I know I added it.

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This is the recommended path modification from home-brew, but it is specific to my shell. I will better document this and generalize it

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eval "$(/opt/homebrew/bin/brew shellenv)"

Install packages using homebrew
-------------------------------

.. code-block::

brew install bison cmake gfortran git-lfs open-mpi lapack python3 ninja m4
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I like ninja, but it isn't necessary I guess?

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It is not necessary, but for geos, ninja does compile much faster than make

echo 'export PATH="/opt/homebrew/opt/bison/bin:$PATH"' >> ~/.zshrc
echo 'export PATH="/opt/homebrew/opt/m4/bin:$PATH"' >> ~/.zshrc
git lfs install

Clone GEOS
----------

.. code-block::

git clone [email protected]:GEOS-DEV/GEOS.git
cd GEOS
git submodule init
git submodule update
cd ..

Clone thirdPartyLibs
--------------------

.. code-block::

git clone [email protected]:GEOS-DEV/thirdPartyLibs.git
cd thirdPartyLibs
git submodule init
git submodule update
git lfs pull


Configure and build thirdPartyLibs
---------------------------------

.. code-block::

python3 scripts/config-build.py -hc ../GEOS/host-configs/apple/macOS_arm.cmake -bt Release

You will get a warning you can ignore

.. code-block::

CMake Warning at /Users/settgast1/Codes/geos/GEOS/host-configs/tpls.cmake:10 (message):
'GEOS_TPL_DIR' does not exist.


Continue with the build

.. code-block::

cd build-macOS_arm-release
make

You will get an error at the end...you can ignore it.

.. code-block::

[100%] Linking CXX executable ../../../tests/blt_mpi_smoke
ld: warning: -commons use_dylibs is no longer supported, using error treatment instead
ld: file not found: @rpath/libquadmath.0.dylib for architecture arm64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
Comment on lines +77 to +79
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I actually don't think I get this error.

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@rrsettgast rrsettgast Aug 1, 2024 •
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really? we are going to have to compare configurations tomorrow. You have an M1 or an M2? I have this error on both M1 and M2. Are you on Sonoma (MacOS 14.6)?

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M1

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I do get the linker error (M1 / macOS 13 / apple clang 14)

make[2]: *** [tests/blt_mpi_smoke] Error 1
make[1]: *** [blt/tests/smoke/CMakeFiles/blt_mpi_smoke.dir/all] Error 2
make: *** [all] Error 2


Build GEOS
----------

.. code-block::

cd ../../GEOS
python3 scripts/config-build.py -hc host-configs/apple/macOS_arm.cmake -bt Release --ninja
cd build-macOS_arm-release
ninja geosx
2 changes: 2 additions & 0 deletions src/docs/sphinx/buildGuide/Index.rst
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Expand Up @@ -18,3 +18,5 @@ Welcome to the GEOS build guide.
SpackUberenv

ContinuousIntegration

AppleMacOS
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