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feat: Update pbmm2 to 1.13.1 #342

feat: Update pbmm2 to 1.13.1

feat: Update pbmm2 to 1.13.1 #342

Triggered via pull request December 14, 2023 21:34
Status Failure
Total duration 9m 40s
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lint-test-workflows.yml

on: pull_request
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2 errors
wdl-ci
Error: From https://github.com/PacificBiosciences/HiFi-human-WGS-WDL * [new branch] develop -> origin/develop * [new branch] dockstore -> origin/dockstore * [new branch] feature/deepvariant-1.6 -> origin/feature/deepvariant-1.6 * [new branch] feature/deepvariant-1.6.0 -> origin/feature/deepvariant-1.6.0 * [new branch] feature/deepvariant-gpu -> origin/feature/deepvariant-gpu * [new branch] feature/hiphase-1.0-trgt -> origin/feature/hiphase-1.0-trgt * [new branch] feature/paraphase-3.0 -> origin/feature/paraphase-3.0 * [new branch] feature/split-ubam -> origin/feature/split-ubam * [new branch] feature/trgt-0.7 -> origin/feature/trgt-0.7 * [new branch] feature/trgt-0.7.0 -> origin/feature/trgt-0.7.0 * [new branch] hotfix/fix-history-main -> origin/hotfix/fix-history-main * [new branch] hotfix/terra-pbsv-memory-dockstore -> origin/hotfix/terra-pbsv-memory-dockstore * [new branch] main -> origin/main * [new branch] pharmcat -> origin/pharmcat * [new tag] v0.9.0-beta -> v0.9.0-beta * [new tag] v0.9.0-beta-dockstore -> v0.9.0-beta-dockstore * [new tag] v1.0.2 -> v1.0.2 * [new tag] v1.0.2-dockstore -> v1.0.2-dockstore * [new tag] v1.0.3 -> v1.0.3 * [new tag] v1.0.3-dockstore -> v1.0.3-dockstore * [new tag] v1.1.0 -> v1.1.0 * [new tag] v1.1.0-dockstore -> v1.1.0-dockstore Fetching submodule workflows/wdl-common fatal: remote error: upload-pack: not our ref 85f1475a1590d5d980dcea46c6b40aa79e2a025d Errors during submodule fetch: workflows/wdl-common
wdl-ci
Error: From https://github.com/PacificBiosciences/HiFi-human-WGS-WDL * [new branch] develop -> origin/develop * [new branch] dockstore -> origin/dockstore * [new branch] feature/deepvariant-1.6 -> origin/feature/deepvariant-1.6 * [new branch] feature/deepvariant-1.6.0 -> origin/feature/deepvariant-1.6.0 * [new branch] feature/deepvariant-gpu -> origin/feature/deepvariant-gpu * [new branch] feature/hiphase-1.0-trgt -> origin/feature/hiphase-1.0-trgt * [new branch] feature/paraphase-3.0 -> origin/feature/paraphase-3.0 * [new branch] feature/split-ubam -> origin/feature/split-ubam * [new branch] feature/trgt-0.7 -> origin/feature/trgt-0.7 * [new branch] feature/trgt-0.7.0 -> origin/feature/trgt-0.7.0 * [new branch] hotfix/fix-history-main -> origin/hotfix/fix-history-main * [new branch] hotfix/terra-pbsv-memory-dockstore -> origin/hotfix/terra-pbsv-memory-dockstore * [new branch] main -> origin/main * [new branch] pharmcat -> origin/pharmcat * [new tag] v0.9.0-beta -> v0.9.0-beta * [new tag] v0.9.0-beta-dockstore -> v0.9.0-beta-dockstore * [new tag] v1.0.2 -> v1.0.2 * [new tag] v1.0.2-dockstore -> v1.0.2-dockstore * [new tag] v1.0.3 -> v1.0.3 * [new tag] v1.0.3-dockstore -> v1.0.3-dockstore * [new tag] v1.1.0 -> v1.1.0 * [new tag] v1.1.0-dockstore -> v1.1.0-dockstore Fetching submodule workflows/wdl-common fatal: remote error: upload-pack: not our ref 85f1475a1590d5d980dcea46c6b40aa79e2a025d Errors during submodule fetch: workflows/wdl-common