Merge pull request #20 from PacificBiosciences/str_support

STR support
PacificBiosciences · Oct 30, 2023 · 2d88c42 · 2d88c42
2 parents 1dc32fc + 1d66d5b
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diff --git a/CHANGELOG.md b/CHANGELOG.md
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+# v1.0.0
+## Changes
+- Added support for tandem repeat calls from [TRGT](https://github.com/PacificBiosciences/trgt); minimum supported version - v0.5.0
+- VCF index files (.tbi) are now automatically generated by HiPhase
+- The reference FASTA file is now a **required** parameter for HiPhase; this change prevents sub-optimal performance caused by forgetting to specify the reference genome
+- HiPhase source code is now released under new LICENSE file
+
+## Fixed
+- Fixed an infinite looping error caused by variants with the same start POS but no overlapping mappings
+
 # v0.10.2
 ## Fixed
 - Replaced a panic caused by large WFA edit distance with a human-readable error message (Resolves #15)