fix minoforge issue in cache job (#774) #170
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
name: Update cache | |
on: | |
schedule: | |
- cron: "0 0 */7 * *" | |
push: | |
branches: | |
- main | |
jobs: | |
update_cache: | |
runs-on: ubuntu-latest | |
defaults: | |
run: | |
shell: bash -el {0} | |
steps: | |
- name: Checkout ARC | |
uses: actions/checkout@v3 | |
- name: Cache RMG | |
id: cache-rmg | |
uses: actions/cache@v2 | |
with: | |
path: RMG-Py | |
key: ${{ runner.os }}-rmg-main | |
- name: Checkout RMG | |
uses: actions/checkout@v3 | |
with: | |
repository: ReactionMechanismGenerator/RMG-Py | |
path: RMG-Py | |
ref: main | |
fetch-depth: 1 | |
- name: Cache RMG-database | |
id: cache-rmg-db | |
uses: actions/cache@v2 | |
with: | |
path: RMG-database | |
key: ${{ runner.os }}-rmgdb-main | |
- name: Checkout RMG-database | |
uses: actions/checkout@v3 | |
with: | |
repository: ReactionMechanismGenerator/RMG-database | |
path: RMG-database | |
ref: main | |
fetch-depth: 1 | |
- name: Cache AutoTST | |
id: cache-autotst | |
uses: actions/cache@v2 | |
with: | |
path: AutoTST | |
key: ${{ runner.os }}-autotst-main | |
restore-keys: | | |
${{ runner.os }}-autotst- | |
- name: Checkout AutoTST | |
if: steps.cache-autotst.outputs.cache-hit != 'true' | |
uses: actions/checkout@v3 | |
with: | |
repository: ReactionMechanismGenerator/AutoTST | |
path: AutoTST | |
ref: main | |
fetch-depth: 1 | |
- name: Cache TS-GCN | |
id: cache-tsgcn | |
uses: actions/cache@v2 | |
with: | |
path: TS-GCN | |
key: ${{ runner.os }}-tsgcn-main | |
restore-keys: | | |
${{ runner.os }}-tsgcn- | |
- name: Checkout TS-GCN | |
if: steps.cache-tsgcn.outputs.cache-hit != 'true' | |
uses: actions/checkout@v3 | |
with: | |
repository: ReactionMechanismGenerator/TS-GCN | |
path: TS-GCN | |
ref: main | |
fetch-depth: 1 | |
- name: Cache KinBot | |
id: cache-kinbot | |
uses: actions/cache@v2 | |
with: | |
path: KinBot | |
key: ${{ runner.os }}-kinbot-2.0.6 | |
restore-keys: | | |
${{ runner.os }}-kinbot- | |
- name: Checkout Kinbot 2.0.6 | |
if: steps.cache-kinbot.outputs.cache-hit != 'true' | |
uses: actions/checkout@v3 | |
with: | |
repository: zadorlab/KinBot | |
path: KinBot | |
ref: v2.0.6 | |
fetch-depth: 1 | |
- name: Cache Packages Packages | |
uses: actions/cache@v2 | |
env: | |
CACHE_NUMBER: 0 | |
with: | |
path: ~/conda_pkgs_dir | |
key: ${{ runner.os }}-conda-${{ env.CACHE_NUMBER }}-${{ hashFiles('environment.yml') }} | |
- name: Setup ARC Env | |
uses: conda-incubator/setup-miniconda@v3 | |
with: | |
auto-update-conda: true | |
environment-file: environment.yml | |
activate-environment: arc_env | |
miniconda-version: latest | |
conda-solver: libmamba | |
- name: Cache ARC env | |
uses: actions/cache@v2 | |
with: | |
path: ${{ env.CONDA }}/envs | |
key: conda-${{ runner.os }}--${{ runner.arch }}--${{ env.CACHE_NUMBER}} | |
env: | |
# Increase this value to reset cache if etc/example-environment.yml has not changed | |
CACHE_NUMBER: 0 | |
id: cache-arc-env | |
- name: Update environment | |
run: mamba env update -n arc_env -f environment.yml | |
if: steps.cache-arc-env.outputs.cache-hit != 'true' |