build based on 75605b1

dev/assets/Manifest.toml

@@ -16,9 +16,9 @@ version = "0.0.1"
 
 [[deps.AbstractAlgebra]]
 deps = ["GroupsCore", "InteractiveUtils", "LinearAlgebra", "MacroTools", "Preferences", "Random", "RandomExtensions", "SparseArrays", "Test"]
-git-tree-sha1 = "237a3ebe3040abca26d889b8b38a5363a797dd68"
+git-tree-sha1 = "7cc9001a0165e4d882f54df8afe4cc163a0975a2"
 uuid = "c3fe647b-3220-5bb0-a1ea-a7954cac585d"
-version = "0.32.1"
+version = "0.32.2"
 
 [[deps.AbstractTrees]]
 git-tree-sha1 = "faa260e4cb5aba097a73fab382dd4b5819d8ec8c"
@@ -144,9 +144,9 @@ version = "0.3.0"
 
 [[deps.Compat]]
 deps = ["UUIDs"]
-git-tree-sha1 = "e460f044ca8b99be31d35fe54fc33a5c33dd8ed7"
+git-tree-sha1 = "8a62af3e248a8c4bad6b32cbbe663ae02275e32c"
 uuid = "34da2185-b29b-5c13-b0c7-acf172513d20"
-version = "4.9.0"
+version = "4.10.0"
 weakdeps = ["Dates", "LinearAlgebra"]
 
     [deps.Compat.extensions]
@@ -210,13 +210,14 @@ deps = ["Printf"]
 uuid = "ade2ca70-3891-5945-98fb-dc099432e06a"
 
 [[deps.DiffEqBase]]
-deps = ["ArrayInterface", "ChainRulesCore", "DataStructures", "DocStringExtensions", "EnumX", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PreallocationTools", "PrecompileTools", "Printf", "RecursiveArrayTools", "Reexport", "Requires", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Static", "StaticArraysCore", "Statistics", "Tricks", "TruncatedStacktraces", "ZygoteRules"]
-git-tree-sha1 = "0895fa2037f528b38c1eb77ded3e6952f2a2b93c"
+deps = ["ArrayInterface", "ChainRulesCore", "DataStructures", "DocStringExtensions", "EnumX", "EnzymeCore", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PreallocationTools", "PrecompileTools", "Printf", "RecursiveArrayTools", "Reexport", "Requires", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Static", "StaticArraysCore", "Statistics", "Tricks", "TruncatedStacktraces", "ZygoteRules"]
+git-tree-sha1 = "dc50f5ef15406701057895deda051f82e53d5773"
 uuid = "2b5f629d-d688-5b77-993f-72d75c75574e"
-version = "6.130.1"
+version = "6.130.2"
 
     [deps.DiffEqBase.extensions]
     DiffEqBaseDistributionsExt = "Distributions"
+    DiffEqBaseEnzymeExt = "Enzyme"
     DiffEqBaseGeneralizedGeneratedExt = "GeneralizedGenerated"
     DiffEqBaseMPIExt = "MPI"
     DiffEqBaseMeasurementsExt = "Measurements"
@@ -228,6 +229,7 @@ version = "6.130.1"
 
     [deps.DiffEqBase.weakdeps]
     Distributions = "31c24e10-a181-5473-b8eb-7969acd0382f"
+    Enzyme = "7da242da-08ed-463a-9acd-ee780be4f1d9"
     GeneralizedGenerated = "6b9d7cbe-bcb9-11e9-073f-15a7a543e2eb"
     MPI = "da04e1cc-30fd-572f-bb4f-1f8673147195"
     Measurements = "eff96d63-e80a-5855-80a2-b1b0885c5ab7"
@@ -239,9 +241,9 @@ version = "6.130.1"
 
 [[deps.DiffEqCallbacks]]
 deps = ["DataStructures", "DiffEqBase", "ForwardDiff", "Functors", "LinearAlgebra", "Markdown", "NLsolve", "Parameters", "RecipesBase", "RecursiveArrayTools", "SciMLBase", "StaticArraysCore"]
-git-tree-sha1 = "38f68ad935bba79836daa66b92285d8deb708c29"
+git-tree-sha1 = "acc53f895588767cbb296d3d8581ebd203524a2e"
 uuid = "459566f4-90b8-5000-8ac3-15dfb0a30def"
-version = "2.31.0"
+version = "2.33.0"
 
     [deps.DiffEqCallbacks.weakdeps]
     OrdinaryDiffEq = "1dea7af3-3e70-54e6-95c3-0bf5283fa5ed"
@@ -327,6 +329,12 @@ git-tree-sha1 = "bdb1942cd4c45e3c678fd11569d5cccd80976237"
 uuid = "4e289a0a-7415-4d19-859d-a7e5c4648b56"
 version = "1.0.4"
 
+[[deps.EnzymeCore]]
+deps = ["Adapt"]
+git-tree-sha1 = "1091d4bbc2f2f7840a65fc0496c782b955dd82fb"
+uuid = "f151be2c-9106-41f4-ab19-57ee4f262869"
+version = "0.6.0"
+
 [[deps.ExponentialUtilities]]
 deps = ["Adapt", "ArrayInterface", "GPUArraysCore", "GenericSchur", "LinearAlgebra", "PrecompileTools", "Printf", "SparseArrays", "libblastrampoline_jll"]
 git-tree-sha1 = "602e4585bcbd5a25bc06f514724593d13ff9e862"
@@ -629,14 +637,15 @@ deps = ["Libdl", "OpenBLAS_jll", "libblastrampoline_jll"]
 uuid = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e"
 
 [[deps.LinearSolve]]
-deps = ["ArrayInterface", "ConcreteStructs", "DocStringExtensions", "EnumX", "FastLapackInterface", "GPUArraysCore", "InteractiveUtils", "KLU", "Krylov", "Libdl", "LinearAlgebra", "PrecompileTools", "Preferences", "RecursiveFactorization", "Reexport", "Requires", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Sparspak", "SuiteSparse", "UnPack"]
-git-tree-sha1 = "deb3a7f3dd520fb90e38c4d77fc1b41ee4e68f68"
+deps = ["ArrayInterface", "ConcreteStructs", "DocStringExtensions", "EnumX", "EnzymeCore", "FastLapackInterface", "GPUArraysCore", "InteractiveUtils", "KLU", "Krylov", "Libdl", "LinearAlgebra", "PrecompileTools", "Preferences", "RecursiveFactorization", "Reexport", "Requires", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Sparspak", "SuiteSparse", "UnPack"]
+git-tree-sha1 = "3afda870553ef0dcb7b2eeb55c7b69c0f8944700"
 uuid = "7ed4a6bd-45f5-4d41-b270-4a48e9bafcae"
-version = "2.7.0"
+version = "2.8.0"
 
     [deps.LinearSolve.extensions]
     LinearSolveBlockDiagonalsExt = "BlockDiagonals"
     LinearSolveCUDAExt = "CUDA"
+    LinearSolveEnzymeExt = "Enzyme"
     LinearSolveHYPREExt = "HYPRE"
     LinearSolveIterativeSolversExt = "IterativeSolvers"
     LinearSolveKernelAbstractionsExt = "KernelAbstractions"
@@ -648,6 +657,7 @@ version = "2.7.0"
     [deps.LinearSolve.weakdeps]
     BlockDiagonals = "0a1fb500-61f7-11e9-3c65-f5ef3456f9f0"
     CUDA = "052768ef-5323-5732-b1bb-66c8b64840ba"
+    Enzyme = "7da242da-08ed-463a-9acd-ee780be4f1d9"
     HYPRE = "b5ffcf37-a2bd-41ab-a3da-4bd9bc8ad771"
     IterativeSolvers = "42fd0dbc-a981-5370-80f2-aaf504508153"
     KernelAbstractions = "63c18a36-062a-441e-b654-da1e3ab1ce7c"
@@ -816,9 +826,9 @@ version = "6.56.0"
 
 [[deps.PDMats]]
 deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse"]
-git-tree-sha1 = "3129380a93388e5062e946974246fe3f2e7c73e2"
+git-tree-sha1 = "bf6085e8bd7735e68c210c6e5d81f9a6fe192060"
 uuid = "90014a1f-27ba-587c-ab20-58faa44d9150"
-version = "0.11.18"
+version = "0.11.19"
 
 [[deps.PackageExtensionCompat]]
 git-tree-sha1 = "fb28e33b8a95c4cee25ce296c817d89cc2e53518"
@@ -897,9 +907,9 @@ uuid = "de0858da-6303-5e67-8744-51eddeeeb8d7"
 
 [[deps.QuadGK]]
 deps = ["DataStructures", "LinearAlgebra"]
-git-tree-sha1 = "eeab25344bf9901146c0200a7ca64ea479f8bf5c"
+git-tree-sha1 = "9ebcd48c498668c7fa0e97a9cae873fbee7bfee1"
 uuid = "1fd47b50-473d-5c70-9696-f719f8f3bcdc"
-version = "2.9.0"
+version = "2.9.1"
 
 [[deps.REPL]]
 deps = ["InteractiveUtils", "Markdown", "Sockets", "Unicode"]
@@ -1005,7 +1015,7 @@ version = "0.6.39"
 deps = ["ADTypes", "ArrayInterface", "ChainRulesCore", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FillArrays", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "TruncatedStacktraces", "ZygoteRules"]
 path = "/home/runner/work/SciMLBase.jl/SciMLBase.jl"
 uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462"
-version = "2.0.1"
+version = "2.0.2"
 
     [deps.SciMLBase.extensions]
     ZygoteExt = "Zygote"
@@ -1131,9 +1141,9 @@ weakdeps = ["OffsetArrays", "StaticArrays"]
 
 [[deps.StaticArrays]]
 deps = ["LinearAlgebra", "Random", "StaticArraysCore"]
-git-tree-sha1 = "51621cca8651d9e334a659443a74ce50a3b6dfab"
+git-tree-sha1 = "d5fb407ec3179063214bc6277712928ba78459e2"
 uuid = "90137ffa-7385-5640-81b9-e52037218182"
-version = "1.6.3"
+version = "1.6.4"
 weakdeps = ["Statistics"]
 
     [deps.StaticArrays.extensions]
@@ -1157,9 +1167,9 @@ version = "1.7.0"
 
 [[deps.StatsBase]]
 deps = ["DataAPI", "DataStructures", "LinearAlgebra", "LogExpFunctions", "Missings", "Printf", "Random", "SortingAlgorithms", "SparseArrays", "Statistics", "StatsAPI"]
-git-tree-sha1 = "75ebe04c5bed70b91614d684259b661c9e6274a4"
+git-tree-sha1 = "1d77abd07f617c4868c33d4f5b9e1dbb2643c9cf"
 uuid = "2913bbd2-ae8a-5f71-8c99-4fb6c76f3a91"
-version = "0.34.0"
+version = "0.34.2"
 
 [[deps.StatsFuns]]
 deps = ["HypergeometricFunctions", "IrrationalConstants", "LogExpFunctions", "Reexport", "Rmath", "SpecialFunctions"]

dev/interfaces/Differentiation/index.html

@@ -29,4 +29,4 @@
 
 function _concrete_solve_forward(args...; kwargs...)
   error("No sensitivity rules exist. Check that you added `using DiffEqSensitivity`")
-end</code></pre><p>The sensitivity mechanism is kept in a separate package because of the high dependency and load time cost introduced by the automatic differentiation libraries. Different choices of automatic differentiation are then selected by the <code>sensealg</code> keyword argument in <code>solve</code>, which is made into a positional argument in the <code>_solve_adjoint</code> and other functions in order to allow dispatch.</p><h2 id="SensitivityADPassThrough"><a class="docs-heading-anchor" href="#SensitivityADPassThrough">SensitivityADPassThrough</a><a id="SensitivityADPassThrough-1"></a><a class="docs-heading-anchor-permalink" href="#SensitivityADPassThrough" title="Permalink"></a></h2><p>The special sensitivity algorithm <code>SensitivityADPassThrough</code> is used to ignore the internal sensitivity dispatches and instead do automatic differentiation directly through the solver. Generally this <code>sensealg</code> is only used internally.</p><h2 id="Note-about-ForwardDiff"><a class="docs-heading-anchor" href="#Note-about-ForwardDiff">Note about ForwardDiff</a><a id="Note-about-ForwardDiff-1"></a><a class="docs-heading-anchor-permalink" href="#Note-about-ForwardDiff" title="Permalink"></a></h2><p>ForwardDiff does not use ChainRules.jl and thus it completely ignores the special handling.</p></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../Common_Keywords/">« Common Keyword Arguments</a><a class="docs-footer-nextpage" href="../PDE/">The PDE Definition Interface »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 0.27.25 on <span class="colophon-date" title="Saturday 23 September 2023 01:33">Saturday 23 September 2023</span>. Using Julia version 1.9.3.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>
+end</code></pre><p>The sensitivity mechanism is kept in a separate package because of the high dependency and load time cost introduced by the automatic differentiation libraries. Different choices of automatic differentiation are then selected by the <code>sensealg</code> keyword argument in <code>solve</code>, which is made into a positional argument in the <code>_solve_adjoint</code> and other functions in order to allow dispatch.</p><h2 id="SensitivityADPassThrough"><a class="docs-heading-anchor" href="#SensitivityADPassThrough">SensitivityADPassThrough</a><a id="SensitivityADPassThrough-1"></a><a class="docs-heading-anchor-permalink" href="#SensitivityADPassThrough" title="Permalink"></a></h2><p>The special sensitivity algorithm <code>SensitivityADPassThrough</code> is used to ignore the internal sensitivity dispatches and instead do automatic differentiation directly through the solver. Generally this <code>sensealg</code> is only used internally.</p><h2 id="Note-about-ForwardDiff"><a class="docs-heading-anchor" href="#Note-about-ForwardDiff">Note about ForwardDiff</a><a id="Note-about-ForwardDiff-1"></a><a class="docs-heading-anchor-permalink" href="#Note-about-ForwardDiff" title="Permalink"></a></h2><p>ForwardDiff does not use ChainRules.jl and thus it completely ignores the special handling.</p></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../Common_Keywords/">« Common Keyword Arguments</a><a class="docs-footer-nextpage" href="../PDE/">The PDE Definition Interface »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 0.27.25 on <span class="colophon-date" title="Tuesday 26 September 2023 13:58">Tuesday 26 September 2023</span>. Using Julia version 1.9.3.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>