black formatting #65
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| name: CI | |
| on: [push] | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: | |
| - '3.8' | |
| - '3.9' | |
| - '3.10' | |
| - '3.11' | |
| steps: | |
| - name: Install Python via conda. | |
| uses: s-weigand/setup-conda@v1 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| conda-channels: defaults,bioconda,conda-forge | |
| - name: Checkout repository | |
| uses: actions/checkout@v2 | |
| with: | |
| lfs: true | |
| - name: Install mamba. | |
| run: conda install -y mamba | |
| - name: Install test dependencies via pip | |
| run: pip install -r requirements/test_black.txt | |
| - name: Run tests | |
| run: pytest | |
| - name: Create text report | |
| run: coverage report | |
| - name: Create XML report for codacy | |
| run: coverage xml | |
| - name: Coveralls | |
| uses: AndreMiras/coveralls-python-action@develop | |
| - name: Run codacy-coverage-reporter | |
| uses: codacy/codacy-coverage-reporter-action@master | |
| with: | |
| project-token: ${{ secrets.CODACY_PROJECT_TOKEN }} | |
| coverage-reports: coverage.xml | |
| if: ${{ matrix.python-version == '3.7' }} | |
| - name: Check style with black | |
| run: make black-check | |
| - name: Check style with flake8 | |
| run: flake8 . |