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Commits on Feb 17, 2025

• Add bioconda install

  ivartb

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Commits on Apr 16, 2024

• Update installation instructions

  ivartb

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  22ed248

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Commits on Mar 26, 2024

• Add image for buffalo example

  ivartb

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  a7ad128

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Commits on Feb 17, 2024

• Support MetaPhlAn2

  ivartb

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  446aad7

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• Fix predict

  ivartb

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  04169fe

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• Fix predict

  ivartb

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Commits on Feb 16, 2024

• Add PyTorch model to fit/predict

  ivartb

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  a4af998

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• Add XGBoost model

  ivartb

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Commits on Feb 12, 2024

• Add images for examples

  ivartb

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  388dd0b

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• Fix metaspades link

  ivartb

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  cab42b7

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• Update python version

  ivartb

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  258845e

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• update requirements

  ivartb

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Commits on Jan 16, 2024

• Fix endline

  ivartb

  committed
  2a4859f

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• Merge branch 'master' of https://github.com/ctlab/metafx

  ivartb

  committed
  f3edb84

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• Update MetaCherchant

  ivartb

  committed
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Commits on Jan 10, 2024

• Update LICENSE

  ivartb

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Commits on Jan 5, 2024

• Add video tutorial

  ivartb

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Commits on Dec 25, 2023

• Fix and prepare wiki

  ivartb

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  d3f86b5

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• Fix feature_analysis logs and parsing

  ivartb

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Commits on Dec 24, 2023

• Fix tests

  ivartb

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  33cc25c

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• Fix redirection for MacOS

  ivartb

  committed
  1c18f09

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• Fix mode

  ivartb

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  310192c

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• Add feature_analysis pipeline

  ivartb

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  bb987d1

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Commits on Dec 12, 2023

• Fix mode

  ivartb

  committed
  b43974b

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• Add basic statistical pipeline metafx chisq and improve feature construction

  ivartb

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  8dd00cc

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• Automatically update metafast.sh

  ivartb

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  36facef

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• Automatically update metafast.sh

  ivartb

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  6be749c

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Commits on Dec 11, 2023

• Add script for Kraken to Bandage transform

  ivartb

  committed
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Commits on Nov 28, 2023

• Remove unneccessary calculation in join_features

  ivartb

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  3c2c38e

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Commits on Nov 20, 2023

• Add --skip-graph parameter for speed up

  ivartb

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  ba6f5f4

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Commits on Nov 19, 2023

• Fix paired naming in metafast pipeline

  ivartb

  committed
  02c73c2

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Commits on Nov 3, 2023

• Refactor Bandage script and add docstrings

  ivartb

  committed
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Commits on Sep 6, 2023

• Remove redundant test run

  ivartb

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  83b2fb2

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Commits on Sep 5, 2023

• Update test.yml

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  ivartb

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Commits on Sep 4, 2023

• Fix naming contigs

  ivartb

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