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Update develop-ref after dtcenter/MET#3008 #2812

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merged 1,149 commits into from
Dec 3, 2024

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Adds new units attribute to Gen-Vx-Mask output
Created by @JohnHalleyGotway

lisagoodrich and others added 30 commits October 25, 2023 16:53
* changing _ to - for header consistency

* changing _ to - for header consistency

* updating all headers for consistency

* updating all headers for consistency and adding spacing

The spacing doesn't seem to be required but it is the convention that we follow for headers.

* updating all headers for consistency

* updating headers for consistency and adding capital letters to  headers

* Using the overline ### to keep index consistent with other indexes

* updating all headers for consistency

* update requirements for building docs to get around build failure where python packages required to build RTD have disappeared from the automatically generated commands from RTD

* updating all headers and some spacing for consistency

* updating headers for consistency

* changing to ### for consistency

* Per #898, fixed the headers for the Release Guide part, chapters, and sections.

* Duplicating changes in develop branch for requirements.txt file

* updating headers

* Per #2669, updated header formatting to resolve errors

* Per #2669, udpating header

* Per #2669, udpating headers

* Per #2669, udpating header

* Per #2669, updated header formatting

* Per #2669, update header formatting

* updating headers

* Per #898, removed space in front of title

* Capitalizing Please

* changing to just italics to match standard formatting

* indenting for consistent formatting

* fixing italics again

* changing from note to warning for consistency

* updating headers, adding some capitalizing to the headers

* fixing typo

Co-authored-by: George McCabe <[email protected]>

* This file was committed but never updated or used

Per Minna, ok to delete.

* Restructuring table of contents to make it more clear which guides are for users and which are for contributors

* fixing formatting for clairity

Co-authored-by: Julie Prestopnik <[email protected]>

---------

Co-authored-by: George McCabe <[email protected]>
Co-authored-by: Julie Prestopnik <[email protected]>
…LE, to easily see which variable should be removed
…puting the index for the season requested instead of all seasons all the time, which also fixes a bug selecting which season the user requested. Results are identical for all seasons for the test data for the use case.
* New additions based on the old branch feature_1667_updating_overview

* Moving the release-notes reference label

* Added label for METplus_glossary for use in Documentation conentions section.

* Adding images for the Documentation Conventions section

* Modifying wording and testing formatting in Internal Links section

* Second take on formatting

* Third attempt at formatting

* Fourth attempt at formatting

* Modified wording, sections, and formatting

* Minor modifications

* Added period

* Changed Pretty Table to PrettyTable

* Modify informationg about converting an existing table and adding images

* Resolving errors

* Reformatting

* Moving placement of reference label

* Attempting to fix table title

* Fixed incorrect alignment

* Made changes based on Lisa's suggestions

* Made changes based on Lisa's suggestions

* Made corrections

* Made corrections

* Per #1667, fixing typos

* Per #1667, corrected text

---------

Co-authored-by: Julie Prestopnik <[email protected]>
…rder that they appear in the wrapped MET config file
…id specification string with spaces will be an accepted value
…files within a time window, ci-run-all-diff
…case because changes to the wrapper are needed to fix it after changes to the MET tool were merged
…quests via apk instead of pip because the pip commands began failing -- see PEP668 https://peps.python.org/pep-0668/ -- also changed scripts to create conda environments for use case tests to install all packages in a single call to mamba instead of individual calls
JohnHalleyGotway and others added 26 commits November 13, 2024 09:50
* update version of action to latest

* per #2772, added instructions to run a METplus use case using Apptainer

* Apply suggestions from code review

Co-authored-by: Dan Adriaansen <[email protected]>

* bugfix dtcenter/MET#2899 prevents differences in output from use case, so removing the 'disabled' item to run use case in GHA

* hotfix: remove quotes around input files because logic that obtains python embedding commands as input file arguments handles quotes

* fix tests to match new expected commands

---------

Co-authored-by: Dan Adriaansen <[email protected]>
* added config file and python scripts for fire weather use case

* Improved logic if multiple files were found to use the closest file to the valid time. Assuming that the files are in order, it will use the first file if multiple files match the valid hour or the last file if multiple files match 1 hour prior to the valid hour. This does not factor in if files before and after the valid time were found. Modifications are needed to obtain the correct file if, for example, the valid time is 12Z and there are 1258 and 1159 files available -- in this case the 1258 file will be used even though 1159 is closer.

* rename use case and update configuration to read data from appropriate directories

* per #2560, add new use case to automated tests

* turn of use case to prepare for PR

* removed comments

* added in-progress use case documentation - still needs updates

* fix formatting

* more formatting

* more doc formatting and cleanup

* remove notes from sections that were updated

* doc cleanup

* add thumbnail for new use case

* add description of fire use case category

* turn off use case

* fix SonarQube complaints

* update use case doc to match use case template

* minor formatting change to match template

* update path for kml schema file

* use wildcard to avoid having to reference namespace that includes insecure protocol

* Update documentation to resemble template

---------

Co-authored-by: j-opatz <[email protected]>
* per #2757, add documentation for allow missing input logic

* fix incorrect link to glossary item

* fix typo

* Per #2757, add info and examples for allow missing input logic
* adding contents and version

* adding contents and version

* pbl and precip directory updates

* s2s directory updates

* short_range directory updates

* adding contents and version numbers to last 3 directories

* Removing "UPDATE_SECTION_CONTENT" text

---------

Co-authored-by: Julie Prestopnik <[email protected]>
…ion unless an option is set to override that behavior (in case we need to change how rc is handled). Update automated scripts to get the correct MET Docker images for RC versions (get met-dev/main_vX.Y for RC, get met-dev/develop for betas or dev version, get met/X.Y-latest for official releases). Updated unit tests for component version script to ensure correct behavior occurs
* Per #2779, assigned a number to all use cases that are not run in GHA and added a reason to describe why the use cases have been disabled

* adding location information

* updating location information

* Revert "adding location information"

This reverts commit cc6d185.

* Revert "updating location information"

This reverts commit 5920779.

* added location of input data that is not found with rest of input data for use case category

* added information on how to run generate_release_notes.py script and updated script to clean up some formatting issues

* Per #2789, added release notes for rc1 release

* update version for rc1 release

* fixed broken commands in use case scripts

---------

Co-authored-by: lisagoodrich <[email protected]>
…st data directory prior to creating the main_vX.Y-ref branch.
* updating template first pass

* removing backslash

* removing extra # symbol

* removing spaces.  Keep as is

* removing spaces for consistency

* adding changes to match template

* fixing spacing

* fixing spacing take 2

* Per #2741, correcting typo in OUPUT_BASE in template file

* Per #2741, correcting typo in OUPUT_BASE

* Per #2741, updating sections based on template and template description

* Updated language in several sections, needs additional work on output and config file

* updating for consistency

* Updating file based on suggestions from George

* Updating with suggestions from George

* Updating file based on suggestions from George

* reviewing with Julie

* Per #2741 attempting to resolve errors

* Per #2741, updating template to fix rendering problems

* Per #2741, fixing formatting

* Per #2741 attempting to resolve warnings

* Per #2741, resolving error

* Resolving formatting problems with template

* Fixing formatting problems

* updating for consistency

* fixing formatting

* removing extra spaces

* Updating formatting

* updating for consistency

* adding METplus Workflow times

* modifications

* Update GridStat_fcstCESM_obsGFS_ConusTemp.py

Added some information to the use case

* Update MODE_fcstCESM_obsGPCP_AsianMonsoonPrecip.py

Updates

* Added an extra blank line

* updating for consistency

* fixing spacing

* adding space

* removing Update content

* updating for consistency

* adding a period

* updating for consistency

* updating for consistency

* updating for consistency

* updating for consistency

* adding return

* replacing underlines

* replacing return?

* fixing blank line

* more attempts to fix warnings

* updating for consistency

* adding double colons and stuff

* trying stuff

* trying extra spacing

* Changing Datasets Location info to match template

* Per #2741, updating formatting and wording

* Per #2741, updating after reviewing

* Per #2741, attempting to resolve errors

* updating for consistency

* fixing brackets and section breaks

* adding return

* Per #2741, updating after reviewing

* updating for consistency

* fixing spacing

* adding a pound

* Updating wording for User Scripting

* Updating the text for User Scripting

* Updating User Script section

* Updating text for User Scripting

* Updating text

* adding location information

* adding location information

* updated first cloud file, will use for remaining cloud use cases

* updated language in numerous use case doc files

* updated final marine use case

---------

Co-authored-by: Julie Prestopnik <[email protected]>
Co-authored-by: j-opatz <[email protected]>
Co-authored-by: Christina Kalb <[email protected]>
Co-authored-by: j-opatz <[email protected]>
* marine_and_cryosphere directories

* fixing underlining

* trying to fix warning msg.

* trying to fix warning msg. again

* Removing space before i.e.

* updating medium_range and pbl directories

* deleting empty file

* removing lots of old text

* precipitation files

* removing junk file

* removing extra #

* add return

* updating 3 dirs s2s, space_weather and unstructured_grids

* updating short_range files

* adding tc_and_extra_tc files

* removing defunct -c option

* Updating Datasets section

* Added needed return character before "#Pass"

* Added  /path/to/user_system.conf to end of run_metplus.py line

* Added a comma after "command line"

* Updating file path

* Added fields for empty Satasets section

---------

Co-authored-by: Julie Prestopnik <[email protected]>
@JohnHalleyGotway JohnHalleyGotway added this to the METplus-6.1.0 milestone Dec 3, 2024
@JohnHalleyGotway JohnHalleyGotway linked an issue Dec 3, 2024 that may be closed by this pull request
11 tasks
@JohnHalleyGotway JohnHalleyGotway merged commit ee9ba53 into develop-ref Dec 3, 2024
1 check was pending
@georgemccabe georgemccabe deleted the update_develop_aed77445 branch December 4, 2024 19:16
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Update Truth: For dtcenter/MET#3008