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update RNASeq demo
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SherryDong committed Aug 9, 2021
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7 changes: 6 additions & 1 deletion docs/docs/rnaseq_demo/rnaseq_demo.md
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Expand Up @@ -460,10 +460,15 @@ out2excel(analysis.par$final_ms_tab,out.xlsx = out_file,mark_gene,mark_col)
NetBID.saveRData(analysis.par=analysis.par,step='ms-tab')
```

The main master table files could be found in "result/Chinese_MB/DATA/Chinese_MB_ms_tab.xlsx". The main RData file could be found in "result/Chinese_MB/DATA/analysis.par.Step.ms-tab.RData".

## Step 6: Run NetBID2 or NetBIDshiny for result visualization

```R
For drawing figures for the top drivers or selected driver, please follow the tutorial in [advanced_analysis](../docs/advanced_analysis). Another choice is to use NetBIDshiny to load a server for result visualization.

```R
library(NetBIDshiny)
NetBIDshiny.viewer(load_data_path = 'result/Chinese_MB/DATA/analysis.par.Step.ms-tab.RData')
```

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