feat(ena-submission): Upload ena submission results to Loculus #660
Workflow file for this run
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| name: backend-tests | |
| on: | |
| pull_request: | |
| paths: | |
| - "backend/**" | |
| - ".github/workflows/backend-tests.yml" | |
| push: | |
| branches: | |
| - main | |
| workflow_dispatch: | |
| concurrency: | |
| group: ci-${{ github.ref == 'refs/heads/main' && github.run_id || github.ref }}-backend-tests | |
| cancel-in-progress: true | |
| jobs: | |
| Tests: | |
| runs-on: codebuild-loculus-ci-${{ github.run_id }}-${{ github.run_attempt }} | |
| timeout-minutes: 15 | |
| env: | |
| CROSSREF_USERNAME: ${{ secrets.CROSSREF_USERNAME }} | |
| CROSSREF_TEST_PASSWORD: ${{ secrets.CROSSREF_TEST_PASSWORD }} | |
| CROSSREF_TEST_ENDPOINT: ${{ secrets.CROSSREF_TEST_ENDPOINT }} | |
| CROSSREF_DOI_PREFIX: ${{ secrets.CROSSREF_DOI_PREFIX }} | |
| steps: | |
| - name: Login to Docker Hub | |
| uses: docker/login-action@v3 | |
| with: | |
| username: ${{ secrets.DOCKERHUB_USERNAME }} | |
| password: ${{ secrets.DOCKERHUB_TOKEN_READ_PUBLIC }} | |
| - uses: actions/checkout@v4 | |
| - name: Set up JDK | |
| uses: actions/setup-java@v4 | |
| with: | |
| java-version: "21" | |
| distribution: "adopt" | |
| - name: Setup Gradle | |
| uses: gradle/actions/setup-gradle@v4 | |
| - name: Execute Tests | |
| uses: nick-fields/retry@v3 | |
| with: | |
| command: cd ./backend && ./gradlew test | |
| max_attempts: 3 | |
| timeout_minutes: 10 | |
| retry_wait_seconds: 1 | |
| - name: Check Format And Lint | |
| run: ./gradlew ktlintCheck | |
| working-directory: ./backend |