feat(preprocessing): parse dates into date ranges to correctly represent incomplete dates #315
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| name: preprocessing-tests | |
| on: | |
| pull_request: | |
| paths: | |
| - "preprocessing/nextclade/**" | |
| - ".github/workflows/preprocessing-tests.yaml" | |
| push: | |
| branches: | |
| - main | |
| workflow_dispatch: | |
| concurrency: | |
| group: ci-${{ github.ref == 'refs/heads/main' && github.run_id || github.ref }}-preprocessing-tests | |
| cancel-in-progress: true | |
| jobs: | |
| unitTests: | |
| name: Unit Tests | |
| runs-on: ubuntu-latest | |
| timeout-minutes: 15 | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up micromamba | |
| uses: mamba-org/setup-micromamba@v2 | |
| with: | |
| environment-file: preprocessing/nextclade/environment.yml | |
| micromamba-version: 'latest' | |
| cache-environment: true | |
| post-cleanup: 'all' | |
| - name: Run tests | |
| run: | | |
| pip install -e '.[test]' | |
| pytest | |
| shell: micromamba-shell {0} | |
| working-directory: preprocessing/nextclade/ |