feat(ingest): Use NCBI API key, and don't retry, to not exceed reques…

…t limits
loculus-project · May 10, 2024 · cf5cf0a · cf5cf0a
1 parent 3a1ea87
commit cf5cf0a
Showing 1 changed file with 3 additions and 2 deletions.
diff --git a/ingest/Snakefile b/ingest/Snakefile
@@ -38,14 +38,15 @@ rule all:
 
 
 rule fetch_ncbi_dataset_package:
+    # TODO: #1844 Set API key through secret
     output:
         dataset_package="results/ncbi_dataset.zip",
-    retries: 5
     shell:
         """
         datasets download virus genome taxon {TAXON_ID} \
             --no-progressbar \
-            --filename {output.dataset_package}
+            --filename {output.dataset_package} \
+            --api-key 15c4ff96de265753f878bb08d88ca64df909 \
         """