Fix: values.yaml - nucleotideSequences need to be a list in prepro co…

…nfigs and a dict in referencegenome configs.
loculus-project · May 15, 2024 · f267bcc · f267bcc
1 parent 3a9fc20
commit f267bcc
Showing 1 changed file with 9 additions and 9 deletions.
diff --git a/kubernetes/loculus/values.yaml b/kubernetes/loculus/values.yaml
@@ -391,7 +391,7 @@ defaultOrganisms:
           nextclade_dataset_name: nextstrain/mpox/all-clades
           nextclade_dataset_tag: 2024-04-19--07-50-39Z
           nucleotideSequences:
-            - name: main
+            - main
           genes:
             - OPG001
           batch_size: 5
@@ -837,7 +837,7 @@ defaultOrganisms:
           nextclade_dataset_name: nextstrain/ebola/zaire
           nextclade_dataset_server: https://raw.githubusercontent.com/nextstrain/nextclade_data/ebola/data_output
           nucleotideSequences:
-            - name: main
+            - main
           genes:
             - NP
             - VP35
@@ -1304,7 +1304,7 @@ defaultOrganisms:
           nextclade_dataset_name: nextstrain/wnv/all-lineages
           nextclade_dataset_server: https://raw.githubusercontent.com/nextstrain/nextclade_data/wnv/data_output
           nucleotideSequences:
-            - name: main
+            - main
           genes:
             - capsid
             - prM
@@ -1789,13 +1789,13 @@ defaultOrganisms:
           nextclade_dataset_name: nextstrain/cchf/all-lineages
           nextclade_dataset_server: https://raw.githubusercontent.com/nextstrain/nextclade_data/cchf/data_output
           nucleotideSequences:
-            - name: L
-            - name: M
-            - name: S
+            - L
+            - M
+            - S
           genes:
-            - name: RdRp
-            - name: GPC
-            - name: NP
+            - RdRp
+            - GPC
+            - NP
           batch_size: 100
           processing_spec:
             total_snps: