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feat(ingest): Map more NCBI virus fields to Loculus fields #2441

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merged 1 commit into from
Aug 17, 2024

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anna-parker
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@anna-parker anna-parker commented Aug 16, 2024

resolves #

preview URL: https://ingest-fields-update.loculus.org/

Summary

While compiling pathoplexus/pathoplexus#54 I realized there are more NCBI Virus fields we could map to Loculus fields, I have done this now. I also realized that ALL_FIELDS is unnecessary and removed it to avoid over complicating the defaults.yaml file and the ingest workflow.

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@anna-parker anna-parker changed the title Map more ncbi fields to loculus fields, remove unnecessary all_fields… feat(ingest): Map more NCBI virus fields to Loculus fields Aug 16, 2024
@anna-parker anna-parker added the preview Triggers a deployment to argocd label Aug 16, 2024
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nice

@anna-parker anna-parker merged commit 1ad50d4 into main Aug 17, 2024
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@anna-parker anna-parker deleted the ingest_fields_update branch August 17, 2024 06:26
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2 participants