Merge pull request #611 from nanoporetech/tijyojwad-patch-1 #241
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: build-dorado | |
| on: [push, pull_request] | |
| jobs: | |
| build: | |
| strategy: | |
| matrix: | |
| os: [ubuntu-20.04, windows-2019-large] | |
| include: | |
| - os: windows-2019-large | |
| arch: "-A x64" | |
| runs-on: ${{ matrix.os }} | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Clean up diskspace | |
| if: matrix.os == 'ubuntu-20.04' | |
| run: sudo rm -rf /usr/share/dotnet /opt/ghc /usr/local/share/boost "$AGENT_TOOLSDIRECTORY" | |
| - name: Set up cmake | |
| uses: jwlawson/[email protected] | |
| with: | |
| cmake-version: '3.21.x' | |
| - uses: Jimver/[email protected] | |
| id: cuda-toolkit | |
| with: | |
| cuda: '11.8.0' | |
| - name: Install dependencies from apt | |
| if: matrix.os == 'ubuntu-20.04' | |
| run: sudo apt-get update && sudo apt-get install -y --no-install-recommends libhdf5-dev libssl-dev libzstd-dev autoconf | |
| - name: Set up Windows path | |
| uses: myci-actions/export-env-var-powershell@1 | |
| if: matrix.os == 'windows-2019-large' | |
| with: | |
| name: PATH | |
| value: C:\a\dorado\dorado\dist\bin;$env:PATH | |
| - name: Build dorado | |
| run: | | |
| cmake -S . -B cmake-build ${{ matrix.arch }} | |
| cmake --build cmake-build --config Release -j 8 | |
| - name: Cleanup torch | |
| uses: JesseTG/[email protected] | |
| with: | |
| path: C:\a\dorado\dorado\3rdparty | |
| - name: Test dorado | |
| run: | | |
| cmake --build cmake-build --config Release --target install -j 8 | |
| ctest -C Release --test-dir cmake-build --output-on-failure --verbose |