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Add measles dataset #202

Merged
merged 7 commits into from
Jun 4, 2024
Merged

Add measles dataset #202

merged 7 commits into from
Jun 4, 2024

Commits on May 24, 2024

  1. Add measles dataset

    @kimandrews
    kimandrews committed May 24, 2024
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  2. chore: rebuild [skip ci]

    @nextstrain-bot
    nextstrain-bot committed May 24, 2024
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  3. Update dataset name 

    Update dataset name and path in pathogen.json and README in anticipation of moving dataset to subdirectories.
    @kimandrews
    kimandrews committed May 24, 2024
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  4. Move dataset to subdirectories 

    Create a N450 subdirectory, since future measles datasets could use other parts of the genome; and also create a WHO-2012 subdirectory, since this dataset is based on genotyping guidelines provided by the WHO in 2012, and there could be future revisions to N450 genotyping.
    @kimandrews
    kimandrews committed May 24, 2024
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Commits on Jun 4, 2024

  1. Update tree: Remove time info, add root sequence 

    Commands for creating the tree are here: nextstrain/measles#33
    @kimandrews
    kimandrews committed Jun 4, 2024
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  2. chore: rebuild [skip ci]

    @nextstrain-bot
    nextstrain-bot committed Jun 4, 2024
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  3. data: remove left-over dataset in data_output after renaming

    @rneher
    rneher committed Jun 4, 2024
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