Repositories list

• CASPERapp

  Public
  Python

  •

  Boost Software License 1.0

  •3•3•1•4•Updated Jan 22, 2025Jan 22, 2025

• ctherm-gem

  Public
  HTML

  •

  MIT License

  •2•2•3•17•Updated Dec 8, 2022Dec 8, 2022

• GeCCo

  Public
  Gene expression classifier

  Python

  •

  GNU General Public License v3.0

  •1•0•4•0•Updated Mar 14, 2022Mar 14, 2022

• Casper_Seq_Finder

  Public
  C++

  •0•0•0•0•Updated Feb 19, 2022Feb 19, 2022

• CASPER_OffTarget

  Public
  C++

  •0•0•0•0•Updated Feb 18, 2022Feb 18, 2022

• CASPER

  Public
  Enhanced guide-RNA Design and Targeting Analysis for Precise CRISPR Genome Editing of Single and Consortia of Industrially Relevant and Non-model Organisms

  Python

  •

  GNU General Public License v3.0

  •2•5•2•0•Updated Feb 18, 2022Feb 18, 2022

• modcell-hpc-study

  Public
  Results and analysis with the modcell-hpc tool

  Jupyter Notebook

  •1•0•0•0•Updated Jan 26, 2021Jan 26, 2021

• modcell-hpc

  Public
  High-performance implementation of the ModCell multi-objective strain design tool

  C

  •

  GNU General Public License v3.0

  •1•1•0•0•Updated Apr 22, 2020Apr 22, 2020

• ModCell2

  Public
  Modular cell strain design algorithms

  Jupyter Notebook

  •

  GNU General Public License v3.0

  •2•2•2•0•Updated Nov 4, 2019Nov 4, 2019

• github-views-monitor

  Public
  Monitor views of software distributed through Github

  Python

  •

  MIT License

  •1•0•0•0•Updated Oct 11, 2019Oct 11, 2019

• compare-moea

  Public
  Compare a variety of MOEA to solve the ModCell multiobjecitve strain desing problem

  MATLAB

  •

  GNU General Public License v3.0

  •2•2•2•0•Updated Aug 5, 2019Aug 5, 2019

• CASPERpam

  Public
  Python code and source files used to identify and analyze PAM sequences for the complete NCBI spacerome

  Python

  •1•3•0•0•Updated Feb 15, 2018Feb 15, 2018