v1.3 - Quo vadis, protein?
This is the third minor release (v1.3) introducing a new feature and many improvements and bug fixes.
Compatible database scheme version: 3
New features:
- prediction of signal peptides via DeepSig: #32 (Thanks @Anna-Rehm)
Improvements:
- provide summary with genome & annotation statistics as
.txt
file: #88 (Thanks @hkaspersen) - accept user provided proteins in GenBank format: #89 (Thanks @Tonny-zhou)
- removed alignment gaps (
-
) in input sequences: #87 (Thanks @RotimiDada) - improved sORF overlap filter runtime performance: cb204fb
- improved outputs: 76e07a4 90bfe99
- added more checks & tests: b779e1f 4e6c35d f4103f0 08ebb03 1672a87 26a8ed2
- added
--gram
to CWL file: 2246319
Bug fixes:
- fixed tmRNA predictions that cross sequence origins: #90 (Thanks @LuisFF)
- moved oriC/T/V product to Note in INSDC and compliant GFF3 outputs: 2f5cb1d 716302e 5e1a0d8
- fixed sequence description on Fasta import: bfdf67f
- fixed Fasta import log error: 5209672
- fixed EDAM out types in CWL file: a1a0ad1
And of course all improvements and bug fixes from all v1.2.x patch releases.