Welcome to the GitHub repository for my TFM! This repository serves as a supplementary resource to the main TFM paper. Here, you'll find a information, including code, scripts, and other relevant materials that were pivotal in my research journey.
The primary aim of this repository is to provide a comprehensive view of the methodologies, tools, and scripts employed during the research phase of my TFM. By sharing this, I hope to contribute to the scientific community and ensure transparency and reproducibility of my results.
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Supplementary Information: Dive deeper into the data with additional tables, figures, and explanations that couldn't be included in the main paper due to space constraints, file is Supplementary_info.pdf
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Code & Scripts: A collection of all the scripts used for data analysis, data manipulation, and figure generation. This includes:
- Analysis for ASCAT, DNAcopy
- Analysis for ichor_qdnaseq
- Visualization Callings
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Data: Due to data privacy regulations, raw data may not be hosted here. However, where permissible, processed datasets or example datasets have been included for illustrative purposes. Can be found in the .csv formats.
While this repository primarily serves as an archive for my TFM, feedback, questions, and suggestions are always welcome. Feel free to open an issue or pull request.