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IMP: PacBio Phred Offset is Incorrectly Translated #329

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hagenjp opened this issue May 20, 2024 · 1 comment
Closed

IMP: PacBio Phred Offset is Incorrectly Translated #329

hagenjp opened this issue May 20, 2024 · 1 comment

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@hagenjp
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hagenjp commented May 20, 2024

Improvement Description
PacBio Phred offset is not in range of Phred33

Current Behavior
Currently PacBio sequences will import out of range

Proposed Behavior
Sequences will be imported in range resulting in improved analysis and readability of interactive quality plot

References
https://forum.qiime2.org/t/hifi-16s-analysis/30165/4
https://forum.qiime2.org/t/dada2-denoising-ccs-error-in-learning-error-rates/30188/11

@colinvwood colinvwood self-assigned this May 30, 2024
@colinvwood colinvwood moved this from Backlog to In Analysis in 2024.10 🎃 May 30, 2024
@github-project-automation github-project-automation bot moved this to Backlog in 2024.10 🎃 May 30, 2024
@lizgehret lizgehret moved this from In Analysis to Backlog in 2024.10 🎃 Jun 13, 2024
@colinvwood colinvwood moved this from Backlog to In Development in 2024.10 🎃 Jul 3, 2024
@colinvwood colinvwood moved this from In Development to Needs Review in 2024.10 🎃 Jul 4, 2024
@lizgehret lizgehret moved this from Needs Review to In Review in 2024.10 🎃 Jul 13, 2024
@gregcaporaso
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Closed by qiime2/q2-demux#162

@gregcaporaso gregcaporaso moved this from In Review to Changelog Needed in 2024.10 🎃 Jul 25, 2024
@gregcaporaso gregcaporaso moved this from Changelog Needed to Completed in 2024.10 🎃 Jul 25, 2024
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