Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Add support for reading samples from a file (-S) #67

Closed
jeromekelleher opened this issue Aug 29, 2024 · 1 comment
Closed

Add support for reading samples from a file (-S) #67

jeromekelleher opened this issue Aug 29, 2024 · 1 comment

Comments

@jeromekelleher
Copy link
Contributor

This is needed when there are lots of samples, because command lines get too long for the shell.

Note that we should be careful to match the semantics of bcftools here when the file is empty (see also #61)

@Will-Tyler
Copy link
Contributor

I created a separate issue (#78) for the empty file semantics. The other part is implemented in #76. Should be good to close this issue.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

2 participants