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@sib-swiss

SIB Swiss Institute of Bioinformatics

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  1. training-collection training-collection Public

    Collection of bioinformatics training materials

    Python 983 182

  2. single-cell-training single-cell-training Public

    SIB course on single cell transcriptomics by mostly using the Seurat pipeline

    R 78 36

  3. intermediate-python-training intermediate-python-training Public

    Jupyter Notebook 63 26

  4. first-steps-with-python-training first-steps-with-python-training Public

    repository of the 3-day course "First steps with Python in Life Sciences" from SIB-training

    Jupyter Notebook 54 16

  5. first-steps-with-R-training first-steps-with-R-training Public

    repository of the 2-day course "First steps with R in Life Sciences" from SIB-training

    R 42 12

  6. intro-machine-learning-training intro-machine-learning-training Public

    Jupyter Notebook 38 15

Repositories

Showing 10 of 123 repositories
  • cancer-variants-training Public
    sib-swiss/cancer-variants-training’s past year of commit activity
    Shell 1 CC-BY-4.0 2 0 0 Updated Nov 29, 2024
  • kgsteward Public

    Knwowledge Graph Steward - Command line tool to help manage RDF store (GraphDB)

    sib-swiss/kgsteward’s past year of commit activity
    Python 5 GPL-3.0 2 0 1 Updated Nov 29, 2024
  • obelisk-docker Public
    sib-swiss/obelisk-docker’s past year of commit activity
    Shell 0 0 0 0 Updated Nov 29, 2024
  • enrichment-analysis-training Public

    Course material for Enrichment analysis course by SIB

    sib-swiss/enrichment-analysis-training’s past year of commit activity
    8 8 5 0 Updated Nov 28, 2024
  • fair-training-guide Public
    sib-swiss/fair-training-guide’s past year of commit activity
    0 CC-BY-4.0 0 1 0 Updated Nov 27, 2024
  • sparql-editor Public

    💫 A standard web component to deploy a user-friendly SPARQL query editor for one or more endpoints. Built on the popular YASGUI editor, it provides context-aware autocomplete for classes and predicates based on the content of the endpoints.

    sib-swiss/sparql-editor’s past year of commit activity
    TypeScript 4 MIT 0 5 0 Updated Nov 27, 2024
  • sendcrypt Public

    Modern and easy to use client to securely send encrypted sensitive data by SFTP. Linux, MacOS, and Windows.

    sib-swiss/sendcrypt’s past year of commit activity
    TypeScript 1 MIT 0 0 0 Updated Nov 26, 2024
  • dsSwissKnife Public
    sib-swiss/dsSwissKnife’s past year of commit activity
    R 4 1 0 0 Updated Nov 26, 2024
  • statistics-and-machine-learning-training Public
    sib-swiss/statistics-and-machine-learning-training’s past year of commit activity
    Jupyter Notebook 20 CC-BY-4.0 7 0 0 Updated Nov 25, 2024
  • NGS-introduction-training Public

    SIB course that introduces analysis of NGS data

    sib-swiss/NGS-introduction-training’s past year of commit activity
    Shell 15 CC-BY-4.0 12 4 0 Updated Nov 25, 2024
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