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@rootze rootze released this 26 Oct 20:36
· 38 commits to main since this release
v1.0.1
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What's Changed

  • updates in ArchR2Signac functions to read fragments file not only from 10X Genomics, but also other fragments file not organized as cellranger-atac count outputs.
    Please read the tutorial in README.md https://github.com/swaruplabUCI/ArchRtoSignac
    #' fragments_fromcellranger This is an Yes or No selection ("NO" | "N" | "No" or "YES" | "Y" | "Yes")
    #' fragments_file_extension File_Extension for fragments files (typically they should be '.tsv.gz' or '.fragments.tsv.gz')
  • updates in R Documentation
  • updates in readme and function descriptions

Contributors

@rootze modified the draft code to functions, added new functions, and made the ArchRtoSignac package
@emilymiyoshi made functions more accessible
@smorabit made the draft code

Full Changelog: https://github.com/swaruplabUCI/ArchRtoSignac/commits/v1.0.1

Contributors

smorabit, rootze, and emilymiyoshi
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