Merge pull request #211 from umccr/enhancement/update-run-info-xml

Update runinfo xml regex
umccr · Feb 23, 2024 · 974b54d · 974b54d
2 parents 962d813 + 6322165
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diff --git a/Changelog.md b/Changelog.md
@@ -4,6 +4,16 @@ Changes in this log refer only to changes that make it to the 'main' branch. and
 
 For changes in deployment, please see the [deployment changelog](deploy/cttso-ica-to-pieriandx-cdk/Changelog.md) 
 
+## 2024-02-24
+
+> Author: Alexis Lucattini
+> Email: [[email protected]](mailto:[email protected])
+
+### Hotfixes
+* Fix Run info xml regex, run info may also be named RunInfo.abc.xml (https://github.com/umccr/cttso-ica-to-pieriandx/pull/211)
+  * Resolves https://github.com/umccr/cttso-ica-to-pieriandx/issues/210
+
+
 ## 2023-11-27
 
 > Author: Alexis Lucattini

diff --git a/utils/globals.py b/utils/globals.py
@@ -106,7 +106,7 @@
 #########################
 # RunInfo.xml
 #########################
-RUN_INFO_XML_REGEX = re.compile(r"gds://(?:bssh\.\S+|production/raw_data)/Runs/([\w+|_]+)_r\.\S+/RunInfo\.xml")
+RUN_INFO_XML_REGEX = re.compile(r"gds://(?:bssh\.\S+|production/raw_data)/Runs/([\w+|_]+)_r\.\S+/RunInfo(?:.*)?\.xml")
 
 #################
 # OUTPUT GLOBALS