Skip to content
This repository has been archived by the owner on Dec 6, 2024. It is now read-only.

Sample type by GLIMS project name / owner #144

Merged
merged 10 commits into from
Oct 18, 2023
Merged

Sample type by GLIMS project name / owner #144

merged 10 commits into from
Oct 18, 2023

Conversation

alexiswl
Copy link
Member

@alexiswl alexiswl commented Oct 17, 2023 •
edited
Loading

alexiswl added 10 commits October 17, 2023 11:41
@alexiswl
Added project name / owner mapping json
0e1a9d8 
* Update the pieriandx case deployment lambdas to accept new metadata
* Collect glims info from limsrow instead
* Update function docs to contain correct columns

* Resolves #131 / #132 / #134 / #135
@alexiswl
Added deleted lims sheet
a57c876 
Filter out deleted rows with assignments to ToBeDeleted user

Resolves #133
@alexiswl
Add portal run id to pieriandx sequence run
7b919f1 
Resolves #130
@alexiswl
Allow both 'sub_panel' and 'subpanel'
8f700b4 
Resolves #139
@alexiswl
Merge pull request #143 from umccr/enhancement/allow-sub-panel-name
d05577b
@alexiswl
Merge pull request #142 from umccr/enhancement/add-flowcell-id-to-pie…
febfdc0 
…riandx-submission-run
@alexiswl
Merge pull request #141 from umccr/enhancement/use-project-owner-name…
d794bc2 
…-mapping
@alexiswl
Merge pull request #140 from umccr/enhancement/add-deleted-lims-sheet
3fdf7f9
@alexiswl
Move code chunk to after date_of_birth is defined
6f97b85
@alexiswl
Updated change logs and readmes with new project owner structure
0f270e4
@alexiswl alexiswl added the enhancement New feature or request label Oct 17, 2023
@alexiswl alexiswl self-assigned this Oct 17, 2023
This was linked to issues Oct 17, 2023
Add portal run id to sequence run id name #130
Closed
Use ProjectName / ProjectOwner from GLIMS to determine CGW Sample Type and Identification Type #131
Closed
Add column pieriandx_is_identified to cttso sheet #132
Closed
Add deletion sheet for tracking cases that have been deleted #133
Closed
Add assignee to pieriandx column list #134
Closed
Get all glims attributes from portal limsrow database #135
Closed
Move to ghcr.io for deploying cttso docker images #136
Closed
Allow both sub_panel and subpanel as valid panel types #139
Closed
@alexiswl alexiswl removed a link to an issue Oct 17, 2023
Move to ghcr.io for deploying cttso docker images #136
Closed
@alexiswl alexiswl changed the title Added project name / owner mapping json Sample type by GLIMS project name / owner Oct 18, 2023
@alexiswl alexiswl merged commit b34c3ec into main Oct 18, 2023
2 checks passed
Sign up for free to subscribe to this conversation on GitHub. Already have an account? Sign in.
Reviewers
No reviews
Assignees

@alexiswl alexiswl

Labels
enhancement New feature or request
Projects
None yet
Milestone
No milestone
1 participant
@alexiswl