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Update run info xml regex #212

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Feb 23, 2024
Merged

Update run info xml regex #212

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342fedc
Update runinfo xml regex
alexiswl Feb 23, 2024
6322165
Update changelog
alexiswl Feb 23, 2024
974b54d
Merge pull request #211 from umccr/enhancement/update-run-info-xml
alexiswl Feb 23, 2024
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10 changes: 10 additions & 0 deletions Changelog.md
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Expand Up @@ -4,6 +4,16 @@ Changes in this log refer only to changes that make it to the 'main' branch. and

For changes in deployment, please see the [deployment changelog](deploy/cttso-ica-to-pieriandx-cdk/Changelog.md)

## 2024-02-24

> Author: Alexis Lucattini
> Email: [[email protected]](mailto:[email protected])

### Hotfixes
* Fix Run info xml regex, run info may also be named RunInfo.abc.xml (https://github.com/umccr/cttso-ica-to-pieriandx/pull/211)
* Resolves https://github.com/umccr/cttso-ica-to-pieriandx/issues/210


## 2023-11-27

> Author: Alexis Lucattini
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2 changes: 1 addition & 1 deletion utils/globals.py
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Expand Up @@ -106,7 +106,7 @@
#########################
# RunInfo.xml
#########################
RUN_INFO_XML_REGEX = re.compile(r"gds://(?:bssh\.\S+|production/raw_data)/Runs/([\w+|_]+)_r\.\S+/RunInfo\.xml")
RUN_INFO_XML_REGEX = re.compile(r"gds://(?:bssh\.\S+|production/raw_data)/Runs/([\w+|_]+)_r\.\S+/RunInfo(?:.*)?\.xml")

#################
# OUTPUT GLOBALS
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