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Publish NPM package for deployment#270

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brainstorm wants to merge 68 commits intomainumccr/htsget-rs:mainfrom npmjs_deploy_publishingumccr/htsget-rs:npmjs_deploy_publishingCopy head branch name to clipboard

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Commits on Oct 11, 2024

• First pass at stack to construct conversion

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Commits on Oct 14, 2024

• No stack vars/refs in construct

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• Reasonable CDK defaults for region not dependant on Stack

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• Must be semver, otherwise:

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• Doesn't synth without this

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Commits on Oct 15, 2024

• deploy: allow experimental flag to be passed on CDK build code

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• feat: allow retrieving c4gh keys from secrets manager

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• Fix imports/paths

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• feat(config): allow retrieving secret from binary or string

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• docs(config): add section on using Secrets Manager to fetch keys

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• build(deploy): add options to deploy C4GH keys to secrets manager

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Commits on Oct 16, 2024

• fix(storage): ensure c4gh data is read after determining the header size

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• refactor(search): remove unnecessary Arcs and unwraps in test code

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• Merge pull request #271 from umccr/fix/experimental-deploy

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• chore: release

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Commits on Oct 17, 2024

• Merge pull request #272 from umccr/release-plz-2024-10-16T22-45-42Z

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• Cdk synths, fixed issuer making as many optional settings as possible for easy deploy (reasonable defaults)

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• Add app to the test stack

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• Audience is mandatory and we are picking a diffent subdomain.

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Commits on Oct 20, 2024

• fix(deploy): update settings to allow fetching both C4GH and regular files

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• Merge pull request #273 from umccr/fix/deploy-c4gh-settings

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• We have a dev.umccr.org hosted zone already, so don't create an extra one... this setting should probably be called 'usePreExistingHostedZone' I reckon?

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Commits on Oct 21, 2024

• Add changes from #273

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• feat(deploy): add ability to specify Secrets Manager policies separate to copying local keys

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Commits on Oct 22, 2024

• First pass at stack to construct conversion

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• No stack vars/refs in construct

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  ee92a74

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• Must be semver, otherwise:

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• Doesn't synth without this

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  96daf81

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• Fix imports/paths

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• Cdk synths, fixed issuer making as many optional settings as possible for easy deploy (reasonable defaults)

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• Add app to the test stack

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• Audience is mandatory and we are picking a diffent subdomain.

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• We have a dev.umccr.org hosted zone already, so don't create an extra one... this setting should probably be called 'usePreExistingHostedZone' I reckon?

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• Add changes from #273

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• copyExampleKeys and jwtAudience (which is just cognito's client id)

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• Merge pull request #275 from umccr/feat/deploy-secrets-arns

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• Rebase against main, do not copyExampleKeys yet...

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• Merge branch 'npmjs_deploy_publishing' of github.com:umccr/htsget-rs into npmjs_deploy_publishing

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• Remove duplicate config keys on settings

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• First pass at stack to construct conversion

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• No stack vars/refs in construct

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• Must be semver, otherwise:

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• Doesn't synth without this

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  7e8f164

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• Fix imports/paths

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  committed
  d57d1b0

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• Cdk synths, fixed issuer making as many optional settings as possible for easy deploy (reasonable defaults)

  brainstorm

  committed
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• Add app to the test stack

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• Audience is mandatory and we are picking a diffent subdomain.

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• We have a dev.umccr.org hosted zone already, so don't create an extra one... this setting should probably be called 'usePreExistingHostedZone' I reckon?

  brainstorm

  committed
  07874af

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• Add changes from #273

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  5ff9b5e

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• copyExampleKeys and jwtAudience (which is just cognito's client id)

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• Rebase against main, do not copyExampleKeys yet...

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• First pass at stack to construct conversion

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  e13d05c

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• Doesn't synth without this

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  c4abda4

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• Fix imports/paths

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  committed
  78104d0

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• Cdk synths, fixed issuer making as many optional settings as possible for easy deploy (reasonable defaults)

  brainstorm

  committed
  4909b63

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• Add app to the test stack

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  a63c709

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• Add changes from #273

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  0f36759

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• Remove duplicate config keys on settings

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• Merge branch 'npmjs_deploy_publishing' of github.com:umccr/htsget-rs into npmjs_deploy_publishing

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Commits on Oct 28, 2024

• Temporarily avoid clashes with already deployed dev htsget-rs keys... perhaps we should parametrise those secret manager paths if they are not already @mmalenic?

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Commits on Oct 29, 2024

• (temporarily) point to -c4gh secret/public keys in the config too

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• Killing data/crypt4gh in favor of data/c4gh

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• Separate htsget_settings to stateless/stateful without entering into the full non-functional refactoring route.

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Commits on Oct 31, 2024

• Prepare for npmjs publishing (wip):

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Commits on Nov 6, 2024

• [ci skip] Temporarily breaking deployment, renaming package to (CDK) construct, we'll eventually split this deploy folder into a separate repo

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Commits on Nov 22, 2024

• Remove deploy entirely from htsget-rs Rust workspace/repo, move it to htsget-rs-deploy repository, thanks to cargo-lambda/cargo-lambda-cdk#57 and up to PR #68

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• Assets no longer in this repo

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Commits on Nov 26, 2024

• Fixup release.yml GHA so that it clones htsget-deploy under deploy, avoiding release breakage

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