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@dozy dozy released this 18 Apr 16:01
· 653 commits to master since this release
  • switched to disposable-irods 1.3 (iRODS packages from Sanger S3,
    replaced RENCI FTP site)
  • added single-server option
  • added support for data files to change during the tar process
    and to detect and archive those changes
  • individually check the checksum of files local to the gridionxi
    where they are loaded and compare with the iRODS checksum
  • updated the samtools and htslib versions to 1.7
  • added tar file auditor
  • use manifest checksums to confirm file contents
  • support loading PacBio RSII files created using out of date reagents
  • allow a user-supplied checksum to be used in TarPublisher and TarStream
    (so GridIONRunPublisher can allow the checksum of uncompressed data to be used)
  • publish fastq files during the catchup phase
  • allow auditing of older GridION tar files which used a relative path for tarred files
  • archiving changes for illumina sequencing genotype files
  • fix for the regex used when choosing to ignore files
  • minor fix to DataObjectFactory.pm