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21 Open 6 Closed
21 Open 6 Closed
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Issues list

Pyclone Input
#28 opened Nov 19, 2023 by sunyu1010
Reproducibility issue
#27 opened Apr 28, 2023 by jamelee
1
Reproducility issue
#26 opened Apr 28, 2023 by jamelee
Preparing input files for pyclone from Varscan output snp files
#25 opened Mar 3, 2023 by maheshworpaudel5001
Should at least one mutation id overlap between any two of the input samples?
#24 opened May 2, 2022 by lincj1994
ref_count and var_count input for Pyclone
#22 opened Jan 21, 2021 by TnakaNY
3
minor_cn equal to the major_cn
#20 opened Jan 16, 2021 by pawelqs
how to use private somation mutation in pyclone?
#19 opened Aug 20, 2020 by YunjieSong
1
ImportError: No module named cli
#16 opened Mar 23, 2020 by dawe
1
How to classify subclone from PyClone result
#14 opened Jan 10, 2020 by bioxu
Modify x label rotations in parallel_coordinates?
#13 opened Nov 4, 2019 by wangshun1121
recommended inputs for whole exome sequencing data
#12 opened Jun 19, 2019 by JakeConway
Strange values for cellular prevalence and variant allele frequency>?
#11 opened Jun 18, 2019 by jmchan88
1
Mutations in common not found across yamls
#9 opened Jun 4, 2019 by schianta
3
Can Python3 use Pyclone?
#8 opened Apr 18, 2019 by yanglq-bio
1
Fail to reproduce tutorial sample results in 2014 paper
#7 opened Apr 18, 2019 by gengyuncong
1
No pdfs under result/plots/loci
#6 opened Mar 20, 2019 by Tina9
cannot cache function 'log_beta'
#5 opened Dec 6, 2018 by jatintalwar
5
run testfile meet error
#4 opened Dec 5, 2018 by WRui
Incorrect if statement
#2 opened Jul 4, 2018 by janka2012
ValueError: gammavariate: alpha and beta must be > 0.0
#1 opened Jul 11, 2017 by 1988liszt
4
ProTip! Exclude everything labeled bug with -label:bug.