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@iiSeymour iiSeymour released this 04 Oct 09:52
· 25 commits to release-v0.8 since this release
v0.8.1
c3a2952

[0.8.1] (03 Oct 2024)

This release of Dorado includes fixes and improvements to the Dorado 0.8.0 release, including corrected configuration for DNA v5 SUP-compatible 5mC_5hmC and 5mCG_5hmCG models, improved cDNA poly(A) tail estimation for data from MinION flow cells, reduced basecaller startup time on supported GPUs, and more.

  • f74d891 - Corrected bug causing [email protected]_5mC_5hmC@v2 to call CpG contexts only and [email protected]_5mCG_5hmCG@v2 to call all contexts
  • eb46494 - Improve cDNA poly(A) tail estimation for MinION flow cells
  • 762e886 - Cache batch sizes to significantly reduce basecaller startup time on supported GPUs
  • 22269a8 - Prevent "Trim interval is invalid for sequence" error when performing trimming
  • f156ae6 - Prevent write permission error for model download folder when file write is not required
  • fcb9d53 - Include run name in output files from dorado demux even if input files are FASTQ
  • a4c9649 - BED file handling: only split columns on tabs, not spaces; load files with spaces in region names
  • e62cbc8 - Allow comment lines in the middle of the BED file
  • f15c0b3 - Fix compilation in AppleClang 16
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