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274 Open 745 Closed
274 Open 745 Closed
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Issues list

Funannotate
#1087 opened Dec 14, 2024 by Raviteja-gajula
funannotate update stops
#1086 opened Dec 11, 2024 by mgarl-10
funannotate predict clarity on --species parameter
#1085 opened Dec 11, 2024 by IrinaVKuznetsova
ModuleNotFoundError: No module named 'distro' v.1.8.17
#1082 opened Nov 29, 2024 by IrinaVKuznetsova
SNAP prediction failed and overlaps exon of the .zff file
#1078 opened Nov 6, 2024 by augauga
Funannotate fix each run give new model genes to must have fixed
#1077 opened Oct 28, 2024 by Malokidz
Funannotate compare stuck at the Proteinortho step for 2 days. The command is at sleep.
#1076 opened Oct 24, 2024 by akshayoo
1
busco_db Installation Issue
#1075 opened Oct 24, 2024 by xianlord93
Bedtools intersect error at the end of funannote predict
#1074 opened Oct 22, 2024 by jaylward2
Another test data failure after fresh conda install
#1073 opened Oct 22, 2024 by amcomeau
2
funannotate predict errors
#1072 opened Oct 15, 2024 by liuyca1
12
BUSCO-mediated training failure in 1.8.17, but not in 1.8.15
#1071 opened Oct 7, 2024 by JWDebler
11
"funannotate remote -m phobius" stops processing my file
#1070 opened Oct 4, 2024 by alpargata97
Augustus Training Error: Missing ExonModel File and UnboundLocalError in Funannotate v1.8.17 Despite Pretrained Species Use
#1069 opened Sep 20, 2024 by kalonji08
5
Funannotate compare
#1067 opened Sep 11, 2024 by Niohuruzh
installing databases failed
#1066 opened Sep 2, 2024 by jacob-israel
4
cannot install funannotate, Executing transaction allthe time.
#1065 opened Aug 31, 2024 by winteraatt
1
funannotate-predict.py: error: unrecognized arguments: --stopCodonExcludedFromCDS=False
#1064 opened Aug 28, 2024 by wangpeng-design
3
Unique proteins from Funannotate compare
#1063 opened Aug 26, 2024 by manjumoorthy95
funannotate compare fails at diamond
#1062 opened Aug 22, 2024 by jsimba-99
2
Funannotate Installation : How to configure funannotate app find the Trimmomatic program?
#1061 opened Aug 21, 2024 by jacob-israel
5
funannotate annotate uses $FUNANNOTATE_DB over -d /path/to/databases for go.obo
#1059 opened Aug 11, 2024 by mjacksonhill
2
Setup of funannotate databases fails
#1058 opened Jul 25, 2024 by ekg123
3
Funannotate train failing when using mysql due to socket error
#1056 opened Jul 13, 2024 by monkfromouterspace
2
Issues with multiple transcripts: MEROPs, BUSCO, PFAM and dbCAN/CAZyme annotations missing for T2 transcripts from final annotation file
#1055 opened Jul 12, 2024 by calizilla
ProTip! Adding no:label will show everything without a label.