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15 Open 6 Closed
15 Open 6 Closed
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Issues list

GC and mappability corrected read depth data for hg38
#28 opened Nov 20, 2023 by Bio-LiHe
1
calculate ratio between tumor and normal sample’s WGS read counts
#24 opened Jan 30, 2023 by Bio-LiHe
2
Getting error 'Killed' upon running in docker container
#22 opened Oct 13, 2022 by shashkat
Error in the final step (R): 'by' appears to evaluate to column names but isn't c() or key()'
#20 opened May 17, 2022 by Giuseppe1995
1
invalid class "BigWigFile" error when running frag with bundled example files
#19 opened Feb 10, 2022 by hillan141
data.table breaks fragCounter
#16 opened Oct 19, 2021 by jamesdalg
2
GC and mappability RDS files for hg19 WGS missing?
#15 opened Aug 24, 2021 by ehjChun
unable to call "samtools"
#14 opened Aug 24, 2021 by ehjChun
2
Allow users to provide coverage data and only perform GC and mappability correction
#12 opened Jul 8, 2021 by ShaiberAlon
@ShaiberAlon
FragCounter not reading from cov.rds files
#8 opened Feb 4, 2021 by oriolpich
build my own gc and map rds file
#6 opened Oct 8, 2020 by jinghu23
3
Correcting coverage for both hg19 and GRCh37
#5 opened Feb 11, 2020 by kcygan
GC + mappability corrections
#4 opened Jan 23, 2020 by tlesluyes
2
multicoco going wrong
#3 opened Jan 21, 2020 by tlesluyes
1
minmapq is ignored
#2 opened Jan 6, 2020 by tlesluyes
1
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