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gbanco4 edited this page Dec 17, 2024 · 21 revisions

bibliography: 'morinlab.bib' csl: 'NLM.csl' link-citations: true

IL16

Overview

The IL16 gene, which encodes a pro-inflammatory cytokine, plays a role in immune responses. IL-16 is highly expressed in the activated B-cell-like (ABC) subtype of DLBCL compared to the germinal center B-cell-like (GCB) subtype. The role of mutations in lymphomagenesis is not understood. Overall, the mutation rate of IL16 is relatively low in DLBCL. Without further support, this gene may be migrated to Tier 2.

Relevance tier by entity

Entity Tier Description
DLBCL 1 high-confidence DLBCL gene

Mutation incidence in large patient cohorts (GAMBL reanalysis)

Entity source frequency (%)
DLBCL GAMBL genomes 2.29
DLBCL Schmitz cohort 3.83
DLBCL Reddy cohort 2.80
DLBCL Chapuy cohort 5.13

Mutation pattern and selective pressure estimates

include:dnds_IL16.md

include:browser_IL16.md

Expression

References

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