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rdmorin edited this page Jan 7, 2025 · 42 revisions

title: 'Studies' bibliography: 'morinlab.bib'

Entity Method Paired samples Unpaired samples Cell lines Example gene Study
DLBCL Sanger 0 5 0 BCL2 @tanakaFrequentIncidenceSomatic1992
BL Sanger 0 0 9 MYC @johnstonCmycHypermutationBurkitt1992
DLBCL Sanger 11 28 0 MYC @pasqualucciHypermutationMultipleProtooncogenes2001
BL Sanger 0 24 0 TP53 @wildaInactivationARFMDM2p53Pathway2004
DLBCL Sanger 134 0 20 PRDM1 @pasqualucciInactivationPRDM1BLIMP12006
DLBCL Sanger FAS @schollMutationsRegionFAS2007
DLBCL Sanger 6 217 21 CARD11 @lenzOncogenicCARD11Mutations2008
DLBCL Sanger NFKBIA @lakeMutationsNFKBIAEncoding2009
DLBCL Sanger 0 101 TNFAIP3 @compagnoMutationsMultipleGenes2009
FL Sanger 11 251 0 TNFRSF14 @cheungAcquiredTNFRSF14Mutations2010
DLBCL, FL RNAseq, WGS 1 31 7 EZH2 @morinSomaticMutationsAltering2010
DLBCL Sanger 0 382 20 MYD88 @ngoOncogenicallyActiveMYD882011
DLBCL RNAseq, WGS 14 103 10 B2M @morinFrequentMutationHistonemodifying2011
DLBCL exome 6 92 23 CD36 @pasqualucciAnalysisCodingGenome2011
DLBCL, FL exome 7 134 0 CREBBP @pasqualucciInactivatingMutationsAcetyltransferase2011
DLBCL exome, Sanger BRAF @tiacciBRAFMutationsHairycell2011
BL RNAseq, WGS, exome 53 CCND3 @richterRecurrentMutationID32012
DLBCL Sanger MIR142 @kwanhianMicroRNA142Mutated202012
DLBCL WGS 40 0 0 CXCR4 @khodabakhshiRecurrentTargetsAberrant2012
DLBCL exome 55 0 0 ACTB @lohrDiscoveryPrioritizationSomatic2012
BL exome ACAD9 @loveGeneticLandscapeMutations2012
BL RNAseq C16orf48 @schmitzBurkittLymphomaPathogenesis2012
DLBCL exome 34 39 21 ARID1A @zhangGeneticHeterogeneityDiffuse2013
DLBCL Sanger 0 0 6 EBF1 @bohleRoleEarlyBcell2013
DLBCL WGS 40 0 13 ABI3BP @morinMutationalStructuralAnalysis2013
BL Sanger ARHGEF1 @muppidiLossSignalingGa132014
BL RNAseq 0 20 0 CCNF @abateDistinctViralMutational2015
DLBCL Sanger 24 0 0 STAT6 @yildizActivatingSTAT6Mutations2015
DLBCL Sanger MAP2K1 @shinBRAFV600EMAP2K12015
DLBCL exome 14 0 0 XPO1 @mareschalWholeExomeSequencing2016
FL WGS 5 0 0 ATP6AP1 @okosunRecurrentMTORC1activatingRRAGC2016
FL exome 22 0 0 MAP2K1 @louissaintPediatrictypeNodalFollicular2016
DLBCL exome 38 0 0 NFKBIE @morinGeneticLandscapesRelapsed2016
FL exome 61 69 0 ARID1A @krysiakRecurrentSomaticMutations2017
DLBCL exome 96 0 0 BTK @albuquerqueEnhancingKnowledgeDiscovery2017
DLBCL exome 400 601 0 ANKRD17 @reddyGeneticFunctionalDrivers2017
DLBCL exome 137 167 0 CCL4 @chapuyMolecularSubtypesDiffuse2018
DLBCL WGS 153 0 0 AICDA @arthurGenomewideDiscoverySomatic2018
DLBCL exome 48 526 0 CXCR5 @schmitzGeneticsPathogenesisDiffuse2018
BL exome 0 74 0 KMT2C @zhouSporadicEndemicBurkitt2019
BL RNAseq, exome 101 0 0 ALPK2 @paneaWholeGenomeLandscape2019
BL WGS 106 0 0 BACH2 @grandeGenomewideDiscoverySomatic2019
FL panel 0 305 0 CTSS @barariaCathepsinAlterationsInduce2020
DLBCL exome, panel 135 0 0 MS4A1 @rushtonGeneticEvolutionaryPatterns2020
DLBCL WGS 179 2 0 ACTG1 @hubschmannMutationalMechanismsShaping2021
BL panel 0 298 0 ADAMTS5 @burkhardtClinicalRelevanceMolecular2022
BL WGS 193 82 22 CDKN2C @thomasGeneticSubgroupsInform2023
FL exome, panel 0 370 0 ABL2 @russler-germainMutationsAssociatedProgression2023
Entity Method Paired samples Unpaired samples Cell lines Example gene Study
PMBL Sanger GPR126 @wenigerMutationsTumorSuppressor2006
PMBL Sanger STAT6 @ritzRecurrentMutationsSTAT62009
PMBL Sanger TNFAIP3 @schmitzTNFAIP3A20Tumor2009
MZL Sanger BIRC3 @rossiAlterationBIRC3Multiple2011
MZL exome ARID1A @rossiCodingGenomeSplenic2012
PMBL Array/Sanger MAP3K14 @ottoGeneticLesionsTRAF32012
MZL Panel CARD11 @yanBCRTLRSignaling2012
MZL Array/Sanger ATM @braggioGenomicAnalysisMarginal2012
MCL WGS/exome ABCA3 @beaLandscapeSomaticMutations2013
MZL exome AMOTL1 @parryWholeExomeSequencing2013
MCL exome ANK2 @zhangGenomicLandscapeMantle2014
PMBL WGS/Sanger PTPN1 @gunawardanaRecurrentSomaticMutations2014
PMBL Sanger CIITA @mottokGenomicAlterationsCIITA2015
PMBL Sanger CD58 @schneiderAlterationsCD58Gene2015
PMBL exome ARIH2 @reichelFlowSortingExome2015
MZL exome KLHL6 @ganapathiGeneticLandscapeDural2016
PMBL Sanger 1 1 (100.0) XPO1 @jardinRecurrentMutationsExportin2016
PMBL exome/Sanger 1 1 (100.0) NFKBIE @mansouriFrequentNFKBIEDeletions2016
MZL exome/panel 31 8 (25.8) ABCA13 @spinaGeneticsNodalMarginal2016
MCL exome 1 1 (100.0) CARD11 @wuGeneticHeterogeneityPrimary2016
MZL panel 2 0 (0.0) CD9B @vandenbrandRecurrentMutationsGenes2017
MZL exome 28 2 (7.1) ARHGAP20 @jalladesExomeSequencingIdentifies2017
PMBL exome 10 1 (10.0) AKAP6 @tiacciPervasiveMutationsJAKSTAT2018
PMBL Sanger 1 1 (100.0) IL4R @viganoSomaticIL4RMutations2018
PMBL exome 7 4 (57.1) ACTB @wienandGenomicAnalysesFlowsorted2019
PMBL exome 21 6 (28.6) CISH @mottokIntegrativeGenomicAnalysis2019
MCL WGS 5 3 (60.0) BCOR @nadeuGenomicEpigenomicInsights2020
MCL WGS/exome 7 6 (85.7) B2M @pararajalingamCodingNoncodingDrivers2020
PMBL panel 10 1 (10.0) ACTG1 @deschGenotypingCirculatingTumor2020
PMBL exome 11 5 (45.5) ABCA13 @sarkozyMutationalLandscapeGray2021
PMBL exome 14 6 (42.9) BIRC3 @dunsCharacterizationDLBCLPMBL2021
PMBL exome 7 2 (28.6) ARID5B @gomezUltraDeepSequencingReveals2023

References

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