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ZFP36L1

Ryan Morin edited this page Dec 16, 2024 · 24 revisions

bibliography: 'morinlab.bib' csl: 'NLM.csl' link-citations: true

ZFP36L1

Overview

ZFP36L1 is one of a number of genes affected by aberrant somatic hypermutation in B-cell lymphomas, which complicates the interpretation of mutations at this locus.

History

%%{init: { 'logLevel': 'debug', 'theme': 'dark' } }%%
timeline
    title Publication timing
2011-07-27 : Morin : DLBCL
2015-02-12 : Reichel : PMBL
2017-05-01 : Albuquerque : DLBCL
2018-04-12 : Schmitz : DLBCL
2018-05-01 : Chapuy : DLBCL
2018-10-01 : Arthur : DLBCL
      2019-09-26 : Panea : BL
2021-05-05 : Hubschmann : DLBCL
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Relevance tier by entity

Entity Tier Description
MCL 2 relevance in MCL not firmly established
PMBL 1 high-confidence PMBL/cHL/GZL gene[@reichelFlowSortingExome2015]
BL 2 aSHM target; Although recurrent, the relevance of mutations in BL is tenuous [@paneaWholeGenomeLandscape2019]
DLBCL 1 aSHM target and high-confidence DLBCL gene [@morinFrequentMutationHistonemodifying2011]

Mutation incidence in large patient cohorts (GAMBL reanalysis)

include:DLBCL_ZFP36L1.md include:BL_ZFP36L1.md

Mutation pattern and selective pressure estimates

include:dnds_ZFP36L1.md

aSHM regions

chr_name hg19_start hg19_end region regulatory_comment
chr14 69257848 69259739 TSS active_promoter

View coding variants in ProteinPaint hg19 or hg38

View all variants in GenomePaint hg19 or hg38

ZFP36L1 Expression

References

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